RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ATP4AP20648 1035 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 CYP2C18P33260 490 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 RFC2P35250 354 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 RFC5P40937 340 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 POLGP54098 1239 aaPredicted RBP15.75■□□□□ 0.11
SSBP3-208ENST00000444533 KRT85P78386 507 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 MDM2Q00987 491 aaPredicted RBP15.75■□□□□ 0.11
SSBP3-208ENST00000444533 PKP1Q13835 747 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 SLC39A14Q15043 492 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 ZRSR1Q15695 479 aaKnown RBP15.75■□□□□ 0.11
SSBP3-208ENST00000444533 XKR9Q5GH70 373 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 PRPF38BQ5VTL8 546 aaKnown RBP15.75■□□□□ 0.11
SSBP3-208ENST00000444533 CATSPER3Q86XQ3 398 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 KCTD17Q8N5Z5 321 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 KRI1Q8N9T8 703 aaKnown RBP15.75■□□□□ 0.11
SSBP3-208ENST00000444533 KCNG4Q8TDN1 519 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 BADQ92934 168 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 USP28Q96RU2 1077 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 FAM49AQ9H0Q0 323 aaPredicted RBP15.75■□□□□ 0.11
SSBP3-208ENST00000444533 CYP26B1Q9NR63 512 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 ANKEF1Q9NU02 776 aa15.75■□□□□ 0.11
SSBP3-208ENST00000444533 TFIP11Q9UBB9 837 aaKnown RBP15.75■□□□□ 0.11
SSBP3-208ENST00000444533 SPTLC2O15270 562 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 GAS2O43903 313 aaKnown RBP15.74■□□□□ 0.11
SSBP3-208ENST00000444533 PFKMP08237 780 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 CKBP12277 381 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 MARCKSP29966 332 aaPredicted RBP15.74■□□□□ 0.11
SSBP3-208ENST00000444533 NASPP49321 788 aaPredicted RBP15.74■□□□□ 0.11
SSBP3-208ENST00000444533 CCL23P55773 120 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 ADAM17P78536 824 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 CDC42EP1Q00587 391 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 EFCAB12Q6NXP0 572 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 LRRC8DQ7L1W4 858 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 TRAPPC12Q8WVT3 735 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 DNAJB3Q8WWF6 145 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 SCLT1Q96NL6 688 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 SUGCTQ9HAC7 445 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 CCDC39Q9UFE4 941 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 CIZ1Q9ULV3 898 aaPredicted RBP15.74■□□□□ 0.11
SSBP3-208ENST00000444533 DNM3Q9UQ16 869 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 AKT3Q9Y243 479 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 SRPRBQ9Y5M8 271 aaKnown RBP15.74■□□□□ 0.11
SSBP3-208ENST00000444533 DNAH12Q6ZR08 3092 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 ALPK3Q96L96 1907 aa15.74■□□□□ 0.11
SSBP3-208ENST00000444533 ARHGEF35A5YM69 484 aa15.73■□□□□ 0.11
SSBP3-208ENST00000444533 RSPH10B2B2RC85 870 aa15.73■□□□□ 0.11
SSBP3-208ENST00000444533 PPP6R2O75170 966 aa15.73■□□□□ 0.11
SSBP3-208ENST00000444533 RSPH10BP0C881 870 aa15.73■□□□□ 0.11
SSBP3-208ENST00000444533 MAGEA10P43363 369 aaPredicted RBP15.73■□□□□ 0.11
SSBP3-208ENST00000444533 RBL2Q08999 1139 aa15.73■□□□□ 0.11
SSBP3-208ENST00000444533 MARCH8Q5T0T0 291 aa15.73■□□□□ 0.11
SSBP3-208ENST00000444533 ANO5Q75V66 913 aa15.73■□□□□ 0.11
SSBP3-208ENST00000444533 RPAINQ86UA6 219 aa15.73■□□□□ 0.11
SSBP3-208ENST00000444533 CABP7Q86V35 215 aa15.73■□□□□ 0.11
SSBP3-208ENST00000444533 TCP11Q8WWU5 503 aa15.73■□□□□ 0.11
SSBP3-208ENST00000444533 FTOQ9C0B1 505 aaKnown RBP eCLIP15.73■□□□□ 0.11
SSBP3-208ENST00000444533 UBE2OQ9C0C9 1292 aaKnown RBP15.73■□□□□ 0.11
SSBP3-208ENST00000444533 MTIF3Q9H2K0 278 aaKnown RBP15.73■□□□□ 0.11
SSBP3-208ENST00000444533 KIAA1024Q9UPX6 916 aa15.73■□□□□ 0.11
SSBP3-208ENST00000444533 MORC2Q9Y6X9 1032 aaPredicted RBP15.73■□□□□ 0.11
SSBP3-208ENST00000444533 PDE4DIPQ5VU43 2346 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 MED24O75448 989 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 C22orf31O95567 290 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 CTSHP09668 335 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 IQCF3P0C7M6 154 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 ACTN1P12814 892 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 ME1P48163 572 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 DNM1Q05193 864 aaKnown RBP15.72■□□□□ 0.11
SSBP3-208ENST00000444533 HIC1Q14526 733 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 PTPAQ15257 358 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 ODR4Q5SWX8 454 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 ZNF618Q5T7W0 954 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 PLA2G4FQ68DD2 849 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 POTEGQ6S5H5 508 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 RUFY4Q6ZNE9 571 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 LINC00301Q8NCQ3 95 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 PIGOQ8TEQ8 1089 aa15.72■□□□□ 0.11
SSBP3-208ENST00000444533 SCAND2PQ9GZW5 306 aaPredicted RBP15.72■□□□□ 0.11
SSBP3-208ENST00000444533 DDX19AQ9NUU7 478 aaKnown RBP15.72■□□□□ 0.11
SSBP3-208ENST00000444533 DBR1Q9UK59 544 aaKnown RBP15.72■□□□□ 0.11
SSBP3-208ENST00000444533 DGAT1O75907 488 aa15.71■□□□□ 0.11
SSBP3-208ENST00000444533 SPATA31C1P0DKV0 1188 aa15.71■□□□□ 0.11
SSBP3-208ENST00000444533 CSF2RAP15509 400 aa15.71■□□□□ 0.11
SSBP3-208ENST00000444533 NPEPPSP55786 919 aa15.71■□□□□ 0.11
SSBP3-208ENST00000444533 MRPS6P82932 125 aaKnown RBP15.71■□□□□ 0.11
SSBP3-208ENST00000444533 TARBP2Q15633 366 aaKnown RBP15.71■□□□□ 0.11
SSBP3-208ENST00000444533 IL17AQ16552 155 aa15.71■□□□□ 0.11
SSBP3-208ENST00000444533 PSRC1Q6PGN9 363 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-208ENST00000444533 DHX38Q92620 1227 aaKnown RBP15.71■□□□□ 0.11
SSBP3-208ENST00000444533 SCLYQ96I15 445 aa15.71■□□□□ 0.11
SSBP3-208ENST00000444533 SPATA32Q96LK8 384 aa15.71■□□□□ 0.11
SSBP3-208ENST00000444533 MTRQ99707 1265 aa15.71■□□□□ 0.11
SSBP3-208ENST00000444533 ATP6V0A4Q9HBG4 840 aa15.71■□□□□ 0.11
SSBP3-208ENST00000444533 WRAP73Q9P2S5 460 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-208ENST00000444533 RBM19Q9Y4C8 960 aaKnown RBP15.71■□□□□ 0.11
SSBP3-208ENST00000444533 TMEM150BA6NC51 233 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 PP2D1A8MPX8 630 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 ZBTB42B2RXF5 422 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 CUTAO60888 179 aa15.7■□□□□ 0.1
SSBP3-208ENST00000444533 MAFO75444 373 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms