RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 KIAA0319LQ8IZA0 1049 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 ETNPPLQ8TBG4 499 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 TMEM40Q8WWA1 233 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 APBB2Q92870 758 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 TMX1Q9H3N1 280 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 PCDHA10Q9Y5I2 948 aa12.31□□□□□ -0.44
SF3A1-203ENST00000444440 COL1A2P08123 1366 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 TMEM150BA6NC51 233 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 ENPP3O14638 875 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 MGEA5O60502 916 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 JAK2O60674 1132 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 SLC26A2P50443 739 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 TFF2Q03403 129 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 C8orf34Q49A92 452 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 LRCH2Q5VUJ6 765 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 RSPH3Q86UC2 560 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 SMAP1Q8IYB5 467 aaPredicted RBP12.3□□□□□ -0.44
SF3A1-203ENST00000444440 CRIPAKQ8N1N5 446 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 LINC01465Q8N7H1 131 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 NSUN7Q8NE18 718 aaKnown RBP12.3□□□□□ -0.44
SF3A1-203ENST00000444440 GTF3C6Q969F1 213 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 TGS1Q96RS0 853 aaKnown RBP12.3□□□□□ -0.44
SF3A1-203ENST00000444440 CELF4Q9BZC1 486 aaKnown RBP12.3□□□□□ -0.44
SF3A1-203ENST00000444440 ORC3Q9UBD5 711 aaPredicted RBP12.3□□□□□ -0.44
SF3A1-203ENST00000444440 PADI3Q9ULW8 664 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 INSL6Q9Y581 213 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 KDM3AQ9Y4C1 1321 aa12.3□□□□□ -0.44
SF3A1-203ENST00000444440 WDR64B1ANS9 1081 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 WNT7AO00755 349 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 GAS7O60861 476 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 STBD1O95210 358 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 VTNP04004 478 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 PSAPP07602 524 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 CLCN3P51790 818 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 NEK4P51957 841 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 FOSBP53539 338 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 PRKCEQ02156 737 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 NR5A1Q13285 461 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 NONOQ15233 471 aaKnown RBP eCLIP12.29□□□□□ -0.44
SF3A1-203ENST00000444440 ZNF484Q5JVG2 852 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 IER5Q5VY09 327 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 CPLX2Q6PUV4 134 aaKnown RBP12.29□□□□□ -0.44
SF3A1-203ENST00000444440 CKAP2LQ8IYA6 745 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 LRRC71Q8N4P6 559 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 BBXQ8WY36 941 aaPredicted RBP12.29□□□□□ -0.44
SF3A1-203ENST00000444440 TNFRSF25Q93038 417 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 CEP89Q96ST8 783 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 YME1L1Q96TA2 773 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 RIT2Q99578 217 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 KIF2CQ99661 725 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 TEKT3Q9BXF9 490 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 DISC1Q9NRI5 854 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 THEGQ9P2T0 379 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 NOC2LQ9Y3T9 749 aaKnown RBP12.29□□□□□ -0.44
SF3A1-203ENST00000444440 SAMM50Q9Y512 469 aa12.29□□□□□ -0.44
SF3A1-203ENST00000444440 EML1O00423 815 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 GPR32O75388 356 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 CDKL5O76039 1030 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 OATP04181 439 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 GATMP50440 423 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 KIZQ2M2Z5 673 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 LETM2Q2VYF4 491 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 EPC2Q52LR7 807 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 GALNT17Q6IS24 598 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 PIK3AP1Q6ZUJ8 805 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 KRT25Q7Z3Z0 450 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 ZNF689Q96CS4 500 aaPredicted RBP12.28□□□□□ -0.44
SF3A1-203ENST00000444440 ZNF668Q96K58 619 aaPredicted RBP12.28□□□□□ -0.44
SF3A1-203ENST00000444440 SH2D3AQ9BRG2 576 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 ERVK-5Q9HDB9 667 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 KCNMB3Q9NPA1 279 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 VAV3Q9UKW4 847 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 GINS2Q9Y248 185 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 SQORQ9Y6N5 450 aa12.28□□□□□ -0.44
SF3A1-203ENST00000444440 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
SF3A1-203ENST00000444440 KCNQ1P51787 676 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 PAK2Q13177 524 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 DRP2Q13474 957 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 ANKRD1Q15327 319 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 TARBP2Q15633 366 aaKnown RBP12.27□□□□□ -0.45
SF3A1-203ENST00000444440 MOXD1Q6UVY6 613 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 MIER3Q7Z3K6 550 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 FAM228AQ86W67 206 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 POTEDQ86YR6 584 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 FAM177A1Q8N128 213 aaPredicted RBP12.27□□□□□ -0.45
SF3A1-203ENST00000444440 BANK1Q8NDB2 785 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 FBXO22Q8NEZ5 403 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 HAS1Q92839 578 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 TNPO1Q92973 898 aaKnown RBP12.27□□□□□ -0.45
SF3A1-203ENST00000444440 OSMRQ99650 979 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 C22orf23Q9BZE7 217 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 WRAP73Q9P2S5 460 aaPredicted RBP12.27□□□□□ -0.45
SF3A1-203ENST00000444440 DDX25Q9UHL0 483 aaKnown RBP12.27□□□□□ -0.45
SF3A1-203ENST00000444440 ADGRA3Q8IWK6 1321 aa12.27□□□□□ -0.45
SF3A1-203ENST00000444440 M0QZ92 97 aa12.26□□□□□ -0.45
SF3A1-203ENST00000444440 DGKIO75912 1065 aa12.26□□□□□ -0.45
SF3A1-203ENST00000444440 SFNP31947 248 aa12.26□□□□□ -0.45
SF3A1-203ENST00000444440 NFX1Q12986 1120 aaKnown RBP12.26□□□□□ -0.45
SF3A1-203ENST00000444440 TJAP1Q5JTD0 557 aa12.26□□□□□ -0.45
SF3A1-203ENST00000444440 EFCAB12Q6NXP0 572 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 719.9 ms