RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 LRFN2Q9ULH4 789 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 PLAGL2Q9UPG8 496 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 MRPL42Q9Y6G3 142 aaKnown RBP13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 NID2Q14112 1375 aa13.2□□□□□ -0.3
UBE2D4-204ENST00000440899 ZBTB42B2RXF5 422 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 RPS6KA5O75582 802 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 MMP1P03956 469 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 ATP4AP20648 1035 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 RPS6KB1P23443 525 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 PSMA5P28066 241 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 SSTR3P32745 418 aaPredicted RBP13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 HYAL1Q12794 435 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 NFX1Q12986 1120 aaKnown RBP13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 TMEM266Q2M3C6 531 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 SMAP1Q8IYB5 467 aaPredicted RBP13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 BBXQ8WY36 941 aaPredicted RBP13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 AGXT2Q9BYV1 514 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 TMX1Q9H3N1 280 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 CDHR5Q9HBB8 845 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 ALG13Q9NP73 1137 aaKnown RBP13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 PRKAG3Q9UGI9 489 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 GINS2Q9Y248 185 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 PCDHA10Q9Y5I2 948 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 MAFBQ9Y5Q3 323 aaPredicted RBP13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 RALGAPA2Q2PPJ7 1873 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 NLRC5Q86WI3 1866 aa13.19□□□□□ -0.3
UBE2D4-204ENST00000440899 ADAMTS3O15072 1205 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 GPR182O15218 404 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 REC8O95072 547 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 PSAPP07602 524 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 IFNAR1P17181 557 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 CIITAP33076 1130 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 LTBRP36941 435 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 SARSP49591 514 aaKnown RBP13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 NTRK3Q16288 839 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 PAN2Q504Q3 1202 aaKnown RBP13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 PRR16Q569H4 304 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 SPPL3Q8TCT6 385 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 PHKBQ93100 1093 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 PPP2R3CQ969Q6 453 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 UIMC1Q96RL1 719 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 ADAM2Q99965 735 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 ERVK-5Q9HDB9 667 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 NOC2LQ9Y3T9 749 aaKnown RBP13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 ARIH1Q9Y4X5 557 aaPredicted RBP13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 PCDHB7Q9Y5E2 793 aa13.18□□□□□ -0.3
UBE2D4-204ENST00000440899 C5orf42Q9H799 3197 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 DENND3A2RUS2 1198 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 MGEA5O60502 916 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 C22orf31O95567 290 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 ITGB1P05556 798 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 ALADP13716 330 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 PLA2G5P39877 138 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 CRYBB1P53674 252 aaPredicted RBP13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 CAMK1Q14012 370 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 KIZQ2M2Z5 673 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 KLHL23Q8NBE8 558 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 CCDC148Q8NFR7 591 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 FAM122AQ96E09 287 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 FAM167AQ96KS9 214 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 SLC26A6Q9BXS9 759 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 IGFLR1Q9H665 355 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 C11orf16Q9NQ32 467 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 RGS18Q9NS28 235 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 C1orf112Q9NSG2 853 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 ST3GAL5Q9UNP4 418 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 CEP131Q9UPN4 1083 aa13.17□□□□□ -0.3
UBE2D4-204ENST00000440899 WDR64B1ANS9 1081 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 C9IYK1 514 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 MAGEB2O15479 319 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 IBSPP21815 317 aaPredicted RBP13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 PDIA3P30101 505 aaKnown RBP13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 USP11P51784 963 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 EVCP57679 992 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 ZP2Q05996 745 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 ADAM15Q13444 863 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 SLC24A5Q71RS6 500 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 TRMT1LQ7Z2T5 733 aaKnown RBP13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 ADHFE1Q8IWW8 467 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 ZNF710Q8N1W2 664 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 METTL13Q8N6R0 699 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 RASGRP4Q8TDF6 673 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 TMEM40Q8WWA1 233 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 LENG9Q96B70 501 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 SH3GLB2Q9NR46 395 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 AAASQ9NRG9 546 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 NRBP2Q9NSY0 501 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 GABBR1Q9UBS5 961 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 HCN4Q9Y3Q4 1203 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 SAMM50Q9Y512 469 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 PCDHB12Q9Y5F1 795 aa13.16□□□□□ -0.3
UBE2D4-204ENST00000440899 FAM86C2PA6NEL3 165 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 PPFIA3O75145 1194 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 GPR32O75388 356 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 CSPG5O95196 566 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 VTNP04004 478 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 DNAJB1P25685 340 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 TMOD1P28289 359 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms