RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 EDEM3Q9BZQ6 932 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 TTYH3Q9C0H2 523 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 TMEM39BQ9GZU3 492 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 KIAA1683Q9H0B3 1180 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 NUCKS1Q9H1E3 243 aaKnown RBP10.1□□□□□ -0.79
HDAC6-209ENST00000440653 PANK4Q9NVE7 773 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 VAV3Q9UKW4 847 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 OGDHLQ9ULD0 1010 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 DNM3Q9UQ16 869 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 MAPK8IP1Q9UQF2 711 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 ADGRG1Q9Y653 693 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 ARID2Q68CP9 1835 aa10.1□□□□□ -0.79
HDAC6-209ENST00000440653 REV3LO60673 3130 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 IGLV3-22A0A075B6J6 115 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 SOWAHDA6NJG2 315 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 B4DLN1 442 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 PES1O00541 588 aaKnown RBP10.09□□□□□ -0.79
HDAC6-209ENST00000440653 MSH4O15457 936 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 EYA4O95677 639 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 COL6A1P12109 1028 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 CYP11B2P19099 503 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 CASQ1P31415 396 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 HSD17B4P51659 736 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 SLC12A3P55017 1021 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 KRT83P78385 493 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 JAG1P78504 1218 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 MOGSQ13724 837 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 BMT2Q1RMZ1 405 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 ANKRD40Q6AI12 368 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 NCAPH2Q6IBW4 605 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 TRIM65Q6PJ69 517 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 STXBP4Q6ZWJ1 553 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 KCNK18Q7Z418 384 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 CCDC170Q8IYT3 715 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 SPICE1Q8N0Z3 855 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 SYT2Q8N9I0 419 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-209ENST00000440653 MNS1Q8NEH6 495 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 SLC5A5Q92911 643 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 SLF1Q9BQI6 1058 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 TSGA10Q9BZW7 698 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 AS3MTQ9HBK9 375 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 SLC39A2Q9NP94 309 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 SEL1LQ9UBV2 794 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 FAM184BQ9ULE4 1060 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 KIAA1024Q9UPX6 916 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 COL4A3BPQ9Y5P4 624 aa10.09□□□□□ -0.79
HDAC6-209ENST00000440653 COL11A1P12107 1806 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-209ENST00000440653 FAM86B1E9PN63 330 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 EIF3DO15371 548 aaKnown RBP eCLIP10.08□□□□□ -0.8
HDAC6-209ENST00000440653 SLC16A3O15427 465 aaKnown RBP10.08□□□□□ -0.8
HDAC6-209ENST00000440653 CTNND1O60716 968 aaKnown RBP10.08□□□□□ -0.8
HDAC6-209ENST00000440653 MED24O75448 989 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 SSBP05455 408 aaKnown RBP eCLIP10.08□□□□□ -0.8
HDAC6-209ENST00000440653 FAM86B2P0C5J1 330 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 SLURP2P0DP57 97 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 HNRNPH3P31942 346 aaKnown RBP10.08□□□□□ -0.8
HDAC6-209ENST00000440653 GOLGA8FQ08AF8 430 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 GOLGA8DPQ0D2H9 430 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 TBC1D8BQ0IIM8 1120 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 PPIL2Q13356 520 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 CCDC85BQ15834 202 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-209ENST00000440653 VWA3BQ502W6 1294 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 CEP55Q53EZ4 464 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 MIIPQ5JXC2 388 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 LRCH2Q5VUJ6 765 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 POTEGQ6S5H5 508 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 RAD9BQ6WBX8 426 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 DYMQ7RTS9 669 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 ACER1Q8TDN7 264 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 KHSRPQ92945 711 aaKnown RBP eCLIP10.08□□□□□ -0.8
HDAC6-209ENST00000440653 KIFC2Q96AC6 838 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 RIT2Q99578 217 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 NUDT12Q9BQG2 462 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 ZNF341Q9BYN7 854 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 HAUS4Q9H6D7 363 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 OLFML3Q9NRN5 406 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 CCPG1Q9ULG6 757 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 WDFY4Q6ZS81 3184 aa10.08□□□□□ -0.8
HDAC6-209ENST00000440653 PTPRFP10586 1907 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 RLFQ13129 1914 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 TTC26A0AVF1 554 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 EFCAB8A8MWE9 144 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 E9PMD0 336 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 TNPO2O14787 897 aaKnown RBP10.07□□□□□ -0.8
HDAC6-209ENST00000440653 GAS7O60861 476 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 NDUFA10O95299 355 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 CFBP00751 764 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 BMP1P13497 986 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 GNG11P61952 73 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 ERVK-24P63145 666 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 ALCAMQ13740 583 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 NFIL3Q16649 462 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 CCDC40Q4G0X9 1142 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 CCDC174Q6PII3 467 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 PRPF38AQ8NAV1 312 aaKnown RBP10.07□□□□□ -0.8
HDAC6-209ENST00000440653 TEKT3Q9BXF9 490 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 NDST4Q9H3R1 872 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 HMX1Q9NP08 348 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-209ENST00000440653 ARGLU1Q9NWB6 273 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-209ENST00000440653 TCEAL9Q9UHQ7 104 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms