RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 PARD6BQ9BYG5 372 aa8.68□□□□□ -1.02
APP-209ENST00000440126 GOLPH3Q9H4A6 298 aa8.68□□□□□ -1.02
APP-209ENST00000440126 SALL4Q9UJQ4 1053 aa8.68□□□□□ -1.02
APP-209ENST00000440126 AJAP1Q9UKB5 411 aaPredicted RBP8.68□□□□□ -1.02
APP-209ENST00000440126 IPO5O00410 1097 aaKnown RBP8.67□□□□□ -1.02
APP-209ENST00000440126 TLR2O60603 784 aa8.67□□□□□ -1.02
APP-209ENST00000440126 FAM13AO94988 1023 aa8.67□□□□□ -1.02
APP-209ENST00000440126 FOSP01100 380 aaPredicted RBP8.67□□□□□ -1.02
APP-209ENST00000440126 HMGB2P26583 209 aaKnown RBP8.67□□□□□ -1.02
APP-209ENST00000440126 KIF11P52732 1056 aa8.67□□□□□ -1.02
APP-209ENST00000440126 RNASE9P60153 205 aaKnown RBP8.67□□□□□ -1.02
APP-209ENST00000440126 LRRC63Q05C16 580 aa8.67□□□□□ -1.02
APP-209ENST00000440126 GPS2Q13227 327 aa8.67□□□□□ -1.02
APP-209ENST00000440126 HYIQ5T013 277 aa8.67□□□□□ -1.02
APP-209ENST00000440126 MFSD4BQ5TF39 518 aa8.67□□□□□ -1.02
APP-209ENST00000440126 ANGEL2Q5VTE6 544 aaKnown RBP8.67□□□□□ -1.02
APP-209ENST00000440126 SYT2Q8N9I0 419 aaPredicted RBP8.67□□□□□ -1.02
APP-209ENST00000440126 ZSWIM2Q8NEG5 633 aa8.67□□□□□ -1.02
APP-209ENST00000440126 TRPM4Q8TD43 1214 aa8.67□□□□□ -1.02
APP-209ENST00000440126 ERGIC2Q96RQ1 377 aa8.67□□□□□ -1.02
APP-209ENST00000440126 LXNQ9BS40 222 aa8.67□□□□□ -1.02
APP-209ENST00000440126 PCIF1Q9H4Z3 704 aa8.67□□□□□ -1.02
APP-209ENST00000440126 GPRC5CQ9NQ84 441 aa8.67□□□□□ -1.02
APP-209ENST00000440126 PGAP2Q9UHJ9 254 aa8.67□□□□□ -1.02
APP-209ENST00000440126 FHOD1Q9Y613 1164 aa8.67□□□□□ -1.02
APP-209ENST00000440126 TESPA1A2RU30 521 aaPredicted RBP8.67□□□□□ -1.02
APP-209ENST00000440126 ATP9AO75110 1047 aa8.67□□□□□ -1.02
APP-209ENST00000440126 PSMD10O75832 226 aa8.67□□□□□ -1.02
APP-209ENST00000440126 NOL4O94818 638 aa8.67□□□□□ -1.02
APP-209ENST00000440126 TRIM49P0CI25 452 aa8.67□□□□□ -1.02
APP-209ENST00000440126 TRIM49CP0CI26 452 aa8.67□□□□□ -1.02
APP-209ENST00000440126 H2AFXP16104 143 aaPredicted RBP8.67□□□□□ -1.02
APP-209ENST00000440126 VCAM1P19320 739 aa8.67□□□□□ -1.02
APP-209ENST00000440126 FECHP22830 423 aa8.67□□□□□ -1.02
APP-209ENST00000440126 HMGCS2P54868 508 aa8.67□□□□□ -1.02
APP-209ENST00000440126 INHBEP58166 350 aa8.67□□□□□ -1.02
APP-209ENST00000440126 KCNH2Q12809 1159 aa8.67□□□□□ -1.02
APP-209ENST00000440126 NAIF1Q69YI7 327 aaPredicted RBP8.67□□□□□ -1.02
APP-209ENST00000440126 GSPT2Q8IYD1 628 aaKnown RBP8.67□□□□□ -1.02
APP-209ENST00000440126 AGBL3Q8NEM8 1001 aa8.67□□□□□ -1.02
APP-209ENST00000440126 BAP1Q92560 729 aa8.67□□□□□ -1.02
APP-209ENST00000440126 PACSIN1Q9BY11 444 aa8.67□□□□□ -1.02
APP-209ENST00000440126 IFIH1Q9BYX4 1025 aaKnown RBP8.67□□□□□ -1.02
APP-209ENST00000440126 GLT8D2Q9H1C3 349 aa8.67□□□□□ -1.02
APP-209ENST00000440126 RPAP3Q9H6T3 665 aaPredicted RBP8.67□□□□□ -1.02
APP-209ENST00000440126 CDC23Q9UJX2 597 aa8.67□□□□□ -1.02
APP-209ENST00000440126 PACSIN2Q9UNF0 486 aaPredicted RBP8.67□□□□□ -1.02
APP-209ENST00000440126 USP20Q9Y2K6 914 aa8.67□□□□□ -1.02
APP-209ENST00000440126 MAFGO15525 162 aa8.67□□□□□ -1.02
APP-209ENST00000440126 IPO7O95373 1038 aaKnown RBP8.67□□□□□ -1.02
APP-209ENST00000440126 CIITAP33076 1130 aa8.67□□□□□ -1.02
APP-209ENST00000440126 PLA2G4AP47712 749 aa8.67□□□□□ -1.02
APP-209ENST00000440126 RPS6P62753 249 aaKnown RBP8.67□□□□□ -1.02
APP-209ENST00000440126 ITGB3BPQ13352 177 aaPredicted RBP8.67□□□□□ -1.02
APP-209ENST00000440126 PLA2G4FQ68DD2 849 aa8.67□□□□□ -1.02
APP-209ENST00000440126 MMS22LQ6ZRQ5 1243 aa8.67□□□□□ -1.02
APP-209ENST00000440126 FAM20AQ96MK3 541 aa8.67□□□□□ -1.02
APP-209ENST00000440126 WRNIP1Q96S55 665 aa8.67□□□□□ -1.02
APP-209ENST00000440126 MMS19Q96T76 1030 aa8.67□□□□□ -1.02
APP-209ENST00000440126 HSD17B14Q9BPX1 270 aa8.67□□□□□ -1.02
APP-209ENST00000440126 KIFC3Q9BVG8 833 aa8.67□□□□□ -1.02
APP-209ENST00000440126 JADE2Q9NQC1 790 aa8.67□□□□□ -1.02
APP-209ENST00000440126 KCNH7Q9NS40 1196 aa8.67□□□□□ -1.02
APP-209ENST00000440126 MRPL11Q9Y3B7 192 aaKnown RBP8.67□□□□□ -1.02
APP-209ENST00000440126 EFCAB8A8MWE9 144 aa8.66□□□□□ -1.02
APP-209ENST00000440126 CETN3O15182 167 aa8.66□□□□□ -1.02
APP-209ENST00000440126 POLR3GO15318 223 aaPredicted RBP8.66□□□□□ -1.02
APP-209ENST00000440126 USO1O60763 962 aaKnown RBP8.66□□□□□ -1.02
APP-209ENST00000440126 SASH3O75995 380 aa8.66□□□□□ -1.02
APP-209ENST00000440126 ECM2O94769 699 aaPredicted RBP8.66□□□□□ -1.02
APP-209ENST00000440126 ECEL1O95672 775 aa8.66□□□□□ -1.02
APP-209ENST00000440126 CYLC1P35663 651 aaPredicted RBP8.66□□□□□ -1.02
APP-209ENST00000440126 NPEPPSP55786 919 aa8.66□□□□□ -1.02
APP-209ENST00000440126 MRPS9P82933 396 aaKnown RBP8.66□□□□□ -1.02
APP-209ENST00000440126 SPA17Q15506 151 aa8.66□□□□□ -1.02
APP-209ENST00000440126 MEA1Q16626 185 aa8.66□□□□□ -1.02
APP-209ENST00000440126 UGCGQ16739 394 aa8.66□□□□□ -1.02
APP-209ENST00000440126 KNOP1Q1ED39 458 aaKnown RBP8.66□□□□□ -1.02
APP-209ENST00000440126 CLEC4DQ8WXI8 215 aa8.66□□□□□ -1.02
APP-209ENST00000440126 LRRC27Q9C0I9 530 aa8.66□□□□□ -1.02
APP-209ENST00000440126 MYO6Q9UM54 1294 aa8.66□□□□□ -1.02
APP-209ENST00000440126 CTDP1Q9Y5B0 961 aaPredicted RBP8.66□□□□□ -1.02
APP-209ENST00000440126 ASTN1O14525 1302 aa8.66□□□□□ -1.02
APP-209ENST00000440126 PDE2AO00408 941 aaPredicted RBP8.66□□□□□ -1.02
APP-209ENST00000440126 CAPN15O75808 1086 aa8.66□□□□□ -1.02
APP-209ENST00000440126 NR3C1P04150 777 aa8.66□□□□□ -1.02
APP-209ENST00000440126 PSMD2Q13200 908 aa8.66□□□□□ -1.02
APP-209ENST00000440126 ODR4Q5SWX8 454 aa8.66□□□□□ -1.02
APP-209ENST00000440126 SRGAP1Q7Z6B7 1085 aa8.66□□□□□ -1.02
APP-209ENST00000440126 TRIM59Q8IWR1 403 aa8.66□□□□□ -1.02
APP-209ENST00000440126 MICALL1Q8N3F8 863 aa8.66□□□□□ -1.02
APP-209ENST00000440126 PPM1EQ8WY54 764 aa8.66□□□□□ -1.02
APP-209ENST00000440126 GOLGA1Q92805 767 aa8.66□□□□□ -1.02
APP-209ENST00000440126 FAM210AQ96ND0 272 aa8.66□□□□□ -1.02
APP-209ENST00000440126 ZCCHC17Q9NP64 241 aaKnown RBP8.66□□□□□ -1.02
APP-209ENST00000440126 ADAMTS1Q9UHI8 967 aa8.66□□□□□ -1.02
APP-209ENST00000440126 PCDHA13Q9Y5I0 950 aa8.66□□□□□ -1.02
APP-209ENST00000440126 ZHX2Q9Y6X8 837 aa8.66□□□□□ -1.02
APP-209ENST00000440126 POLR2AP24928 1970 aaKnown RBP8.65□□□□□ -1.02
APP-209ENST00000440126 ANKRD65E5RJM6 399 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms