RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 TNNC1P63316 161 aa17.95■□□□□ 0.46
CLCNKA-203ENST00000439316 PTK2Q05397 1052 aa17.95■□□□□ 0.46
CLCNKA-203ENST00000439316 AP3B2Q13367 1082 aa17.95■□□□□ 0.46
CLCNKA-203ENST00000439316 CFAP58Q5T655 872 aa17.95■□□□□ 0.46
CLCNKA-203ENST00000439316 EPM2AIP1Q7L775 607 aaPredicted RBP17.95■□□□□ 0.46
CLCNKA-203ENST00000439316 ETNPPLQ8TBG4 499 aa17.95■□□□□ 0.46
CLCNKA-203ENST00000439316 PPM1EQ8WY54 764 aa17.95■□□□□ 0.46
CLCNKA-203ENST00000439316 PIK3R5Q8WYR1 880 aa17.95■□□□□ 0.46
CLCNKA-203ENST00000439316 UIMC1Q96RL1 719 aa17.95■□□□□ 0.46
CLCNKA-203ENST00000439316 TMOD2Q9NZR1 351 aa17.95■□□□□ 0.46
CLCNKA-203ENST00000439316 ZNF70Q9UC06 446 aaPredicted RBP17.95■□□□□ 0.46
CLCNKA-203ENST00000439316 MPHOSPH10O00566 681 aaKnown RBP17.94■□□□□ 0.46
CLCNKA-203ENST00000439316 ACTN1P12814 892 aa17.94■□□□□ 0.46
CLCNKA-203ENST00000439316 GIT2Q14161 759 aa17.94■□□□□ 0.46
CLCNKA-203ENST00000439316 ZNF571Q7Z3V5 609 aaPredicted RBP17.94■□□□□ 0.46
CLCNKA-203ENST00000439316 WHAMMQ8TF30 809 aa17.94■□□□□ 0.46
CLCNKA-203ENST00000439316 IFT81Q8WYA0 676 aa17.94■□□□□ 0.46
CLCNKA-203ENST00000439316 ARMCX3Q9UH62 379 aaPredicted RBP17.94■□□□□ 0.46
CLCNKA-203ENST00000439316 PCDHA1Q9Y5I3 950 aa17.94■□□□□ 0.46
CLCNKA-203ENST00000439316 BZW2Q9Y6E2 419 aaKnown RBP17.94■□□□□ 0.46
CLCNKA-203ENST00000439316 ZNF233A6NK53 670 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 ANKRD65E5RJM6 399 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 AFPP02771 609 aaKnown RBP17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 UCHL3P15374 230 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 PRKCIP41743 596 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 ENOX2Q16206 610 aaKnown RBP17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 KNOP1Q1ED39 458 aaKnown RBP17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 SPDYE2Q495Y8 402 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 CATSPER3Q86XQ3 398 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 BCAS4Q8TDM0 211 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 TAF4BQ92750 862 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 CCDC17Q96LX7 622 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 ZHX3Q9H4I2 956 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 NENFQ9UMX5 172 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 ATRNL1Q5VV63 1379 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 FZD9O00144 591 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 TBX3O15119 743 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 RAD51CO43502 376 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 KIF4AO95239 1232 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 CPP00450 1065 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 SLC9A1P19634 815 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 ANXA13P27216 316 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 HOXD13P35453 343 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 RPS6KA1Q15418 735 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 EMC10Q5UCC4 262 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 KDM7AQ6ZMT4 941 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 ILDR2Q71H61 639 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 SFR1Q86XK3 245 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 SYT2Q8N9I0 419 aaPredicted RBP17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 LRRC57Q8N9N7 239 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 EIF1ADQ8N9N8 165 aaKnown RBP17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 MTMR14Q8NCE2 650 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 C1orf131Q8NDD1 294 aaKnown RBP17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 DCAF4Q8WV16 495 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 VEZTQ9HBM0 779 aa17.93■□□□□ 0.46
CLCNKA-203ENST00000439316 EBAG9O00559 213 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 MEIS2O14770 477 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 KRT14P02533 472 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 SPATA31C1P0DKV0 1188 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 PON1P27169 355 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 RPA1P27694 616 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 ARHGAP4P98171 946 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 BMT2Q1RMZ1 405 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 NBPF9Q3BBW0 867 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 Q4G0T1 1027 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 ERMNQ8TAM6 284 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 PBKQ96KB5 322 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 SPAG5Q96R06 1193 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 REEP2Q9BRK0 252 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 MYOZ2Q9NPC6 264 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 NAGPAQ9UK23 515 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 FBXL5Q9UKA1 691 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 GJA3Q9Y6H8 435 aa17.92■□□□□ 0.46
CLCNKA-203ENST00000439316 A0A087WUV0 522 aaPredicted RBP17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 WNT10BO00744 389 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 PDXKO00764 312 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 CALUO43852 315 aaPredicted RBP17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 ZBTB48P10074 688 aaPredicted RBP17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 HSPA9P38646 679 aaKnown RBP17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 GUCY2FP51841 1108 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 PSMC6P62333 389 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 EPHA7Q15375 998 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 IFI16Q16666 785 aaKnown RBP17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 EXOC3L4Q17RC7 722 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 TTC31Q49AM3 519 aaPredicted RBP17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 SH2D3CQ8N5H7 860 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 RBM46Q8TBY0 533 aaKnown RBP17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 MKL1Q969V6 931 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 LENG9Q96B70 501 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 CSRNP1Q96S65 589 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 P2RX7Q99572 595 aaKnown RBP17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 BHMG1C9JSJ3 638 aaPredicted RBP17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 KCNK3O14649 394 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 SLC16A3O15427 465 aaKnown RBP17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 PABPC4Q13310 644 aaKnown RBP eCLIP17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 PDCLQ13371 301 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 MCTP2Q6DN12 878 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 TADA2BQ86TJ2 420 aa17.91■□□□□ 0.46
CLCNKA-203ENST00000439316 PACS2Q86VP3 889 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms