RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 USP17L11C9JVI0 530 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 USP17L18D6R9N7 530 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 USP17L22D6RA61 530 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 USP17L17D6RBQ6 530 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 USP17L19D6RCP7 530 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 USP17L20D6RJB6 530 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 DCTN3O75935 186 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 ZRANB2O95218 330 aaKnown RBP eCLIP12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 TFAMQ00059 246 aaKnown RBP12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 USP17L24Q0WX57 530 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 GRAPQ13588 217 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 USP17L6PQ6QN14 398 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 POTEBQ6S5H4 581 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 GRAPLQ8TC17 118 aaPredicted RBP12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 SAYSD1Q9NPB0 183 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 ITIH6Q6UXX5 1313 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 FAM205CA6NFA0 338 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 NBPF26B4DH59 902 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 ZNF185O15231 689 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 ECE1P42892 770 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 NBPF10Q6P3W6 841 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 USP49Q70CQ1 688 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 NLGN1Q8N2Q7 840 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 NBPF15Q8N660 670 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 ANKRD36BP1Q96IX9 119 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 SLITRK6Q9H5Y7 841 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 ZNF277Q9NRM2 450 aaPredicted RBP12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 PNPLA7Q6ZV29 1317 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 CDC42BPBQ9Y5S2 1711 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 SYNJ2BP-COX16A0A087WUM0 186 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 RASA4BC9J798 803 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 INO80B-WBP1J3KQ70 363 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 IPO5O00410 1097 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 MAP3K7O43318 606 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 RASA4O43374 803 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 ACTN1P12814 892 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 ACTN3Q08043 901 aaPredicted RBP12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 DPYDQ12882 1025 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 ADSSL1Q8N142 457 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 CNKSR1Q969H4 720 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 INO80BQ9C086 356 aaPredicted RBP12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 CCSER1Q9C0I3 900 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 DBNDD1Q9H9R9 158 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 POLD4Q9HCU8 107 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 COX16Q9P0S2 106 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 NXF1Q9UBU9 619 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 PCDHA6Q9UN73 950 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 PCDHA8Q9Y5H6 950 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 CTDNEP1O95476 244 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 GUCY1A3Q02108 690 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 CCNI2Q6ZMN8 369 aaPredicted RBP12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 RNF207Q6ZRF8 634 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 SRRM1Q8IYB3 904 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 KCTD6Q8NC69 237 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 DDX27Q96GQ7 796 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 TRIM9Q9C026 710 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 HAUS2Q9NVX0 235 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 FBXL5Q9UKA1 691 aa12.02□□□□□ -0.49
SEMA4D-211ENST00000438547 ZNF233A6NK53 670 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 PPP1R37O75864 691 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 CD58P19256 250 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 GCLMP48507 274 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 PEX3P56589 373 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 SNAP25P60880 206 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 FOXP4Q8IVH2 680 aaPredicted RBP12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 HACE1Q8IYU2 909 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 ZNF710Q8N1W2 664 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 SRBD1Q8N5C6 995 aaKnown RBP12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 NACA2Q9H009 215 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 GINM1Q9NU53 330 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 FAF1Q9UNN5 650 aaPredicted RBP12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 SCINQ9Y6U3 715 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 IQANK1A0A1B0GTG1 560 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 ORC4O43929 436 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 TOM1L1O75674 476 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 TFDP1Q14186 410 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 DRAP1Q14919 205 aaPredicted RBP12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 RAPH1Q70E73 1250 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 STAG2Q8N3U4 1231 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 XXYLT1Q8NBI6 393 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 CHMP6Q96FZ7 201 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 CEP95Q96GE4 821 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 SMYD2Q9NRG4 433 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 SRP68Q9UHB9 627 aaKnown RBP12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 NOC2LQ9Y3T9 749 aaKnown RBP12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 USP31Q70CQ4 1352 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 FAM187AA6NFU0 413 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 SRGNP10124 158 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 CHRNA3P32297 505 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 ABCD1P33897 745 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 NAALADL2Q58DX5 795 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 FAM149B1Q96BN6 582 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 GPR101Q96P66 508 aaPredicted RBP12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 HEMGNQ9BXL5 484 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 MLXIPLQ9NP71 852 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 ADAM22Q9P0K1 906 aa12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 NPHP4O75161 1426 aaPredicted RBP12.01□□□□□ -0.49
SEMA4D-211ENST00000438547 POLE2P56282 527 aa12□□□□□ -0.49
SEMA4D-211ENST00000438547 SYT2Q8N9I0 419 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms