RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ATRIPQ8WXE1 791 aa28.28■■■□□ 2.12
CPNE1-216ENST00000437340 IRX2Q9BZI1 471 aaPredicted RBP28.28■■■□□ 2.12
CPNE1-216ENST00000437340 ACAD9Q9H845 621 aa28.28■■■□□ 2.12
CPNE1-216ENST00000437340 NMRK2Q9NPI5 230 aa28.28■■■□□ 2.12
CPNE1-216ENST00000437340 IPO7O95373 1038 aaKnown RBP28.27■■■□□ 2.12
CPNE1-216ENST00000437340 NLRX1Q86UT6 975 aa28.27■■■□□ 2.12
CPNE1-216ENST00000437340 FAM178BQ8IXR5 827 aa28.27■■■□□ 2.12
CPNE1-216ENST00000437340 NSUN6Q8TEA1 469 aaKnown RBP28.27■■■□□ 2.12
CPNE1-216ENST00000437340 SMCR8Q8TEV9 937 aaPredicted RBP28.27■■■□□ 2.12
CPNE1-216ENST00000437340 BAP1Q92560 729 aa28.27■■■□□ 2.12
CPNE1-216ENST00000437340 CEP72Q9P209 647 aa28.27■■■□□ 2.12
CPNE1-216ENST00000437340 TCEAL9Q9UHQ7 104 aa28.27■■■□□ 2.12
CPNE1-216ENST00000437340 SAMM50Q9Y512 469 aa28.27■■■□□ 2.12
CPNE1-216ENST00000437340 CSADQ9Y600 493 aa28.27■■■□□ 2.12
CPNE1-216ENST00000437340 RRP9O43818 475 aaKnown RBP28.27■■■□□ 2.12
CPNE1-216ENST00000437340 NR3C2P08235 984 aa28.27■■■□□ 2.12
CPNE1-216ENST00000437340 ERCC3P19447 782 aa28.27■■■□□ 2.12
CPNE1-216ENST00000437340 NMT1P30419 496 aaKnown RBP28.27■■■□□ 2.12
CPNE1-216ENST00000437340 TTLL12Q14166 644 aaPredicted RBP28.27■■■□□ 2.12
CPNE1-216ENST00000437340 PADI6Q6TGC4 694 aa28.27■■■□□ 2.12
CPNE1-216ENST00000437340 ZNF526Q8TF50 670 aaPredicted RBP28.27■■■□□ 2.12
CPNE1-216ENST00000437340 PCDHB13Q9Y5F0 798 aa28.27■■■□□ 2.12
CPNE1-216ENST00000437340 COL11A1P12107 1806 aaPredicted RBP28.26■■■□□ 2.12
CPNE1-216ENST00000437340 SPDYE16A6NNV3 312 aaPredicted RBP28.26■■■□□ 2.11
CPNE1-216ENST00000437340 WDR64B1ANS9 1081 aa28.26■■■□□ 2.11
CPNE1-216ENST00000437340 TGFB1I1O43294 461 aa28.26■■■□□ 2.11
CPNE1-216ENST00000437340 KCNH2Q12809 1159 aa28.26■■■□□ 2.11
CPNE1-216ENST00000437340 TUBB2AQ13885 445 aa28.26■■■□□ 2.11
CPNE1-216ENST00000437340 CACNA2D4Q7Z3S7 1137 aa28.26■■■□□ 2.11
CPNE1-216ENST00000437340 C4orf19Q8IY42 314 aa28.26■■■□□ 2.11
CPNE1-216ENST00000437340 CNKSR2Q8WXI2 1034 aa28.26■■■□□ 2.11
CPNE1-216ENST00000437340 SYN2Q92777 582 aaPredicted RBP28.26■■■□□ 2.11
CPNE1-216ENST00000437340 INPP4AQ96PE3 977 aaPredicted RBP28.26■■■□□ 2.11
CPNE1-216ENST00000437340 TUBB2BQ9BVA1 445 aa28.26■■■□□ 2.11
CPNE1-216ENST00000437340 TIPINQ9BVW5 301 aa28.26■■■□□ 2.11
CPNE1-216ENST00000437340 BCAS3Q9H6U6 928 aa28.26■■■□□ 2.11
CPNE1-216ENST00000437340 HIP1RO75146 1068 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 MAPTP10636 758 aaKnown RBP28.25■■■□□ 2.11
CPNE1-216ENST00000437340 EPB41P11171 864 aaKnown RBP28.25■■■□□ 2.11
CPNE1-216ENST00000437340 RARRES1P49788 294 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 HERVK_113P62684 666 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 ZNF569Q5MCW4 686 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 ODR4Q5SWX8 454 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 PDXDC1Q6P996 788 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 CCDC155Q8N6L0 562 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 CLMNQ96JQ2 1002 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 CCDC42Q96M95 316 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 SENP7Q9BQF6 1050 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 POLD4Q9HCU8 107 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 MRFAP1Q9Y605 127 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 ZMYM2Q9UBW7 1377 aa28.25■■■□□ 2.11
CPNE1-216ENST00000437340 TESPA1A2RU30 521 aaPredicted RBP28.24■■■□□ 2.11
CPNE1-216ENST00000437340 STAM2O75886 525 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 MAPK7Q13164 816 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 GOLGA5Q8TBA6 731 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 CYP39A1Q9NYL5 469 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 LRRC53A6NM62 1247 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 ATP9AO75110 1047 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 AKAP3O75969 853 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 PSMC5P62195 406 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 KCNA1Q09470 495 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 ZNF746Q6NUN9 644 aaPredicted RBP28.24■■■□□ 2.11
CPNE1-216ENST00000437340 RRAGAQ7L523 313 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 ANKRD13AQ8IZ07 590 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 PURBQ96QR8 312 aaKnown RBP28.24■■■□□ 2.11
CPNE1-216ENST00000437340 MKNK1Q9BUB5 465 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 STRA6Q9BX79 667 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 ELP3Q9H9T3 547 aa28.24■■■□□ 2.11
CPNE1-216ENST00000437340 NOL4O94818 638 aa28.23■■■□□ 2.11
CPNE1-216ENST00000437340 XRCC5P13010 732 aaKnown RBP28.23■■■□□ 2.11
CPNE1-216ENST00000437340 ALCAMQ13740 583 aa28.23■■■□□ 2.11
CPNE1-216ENST00000437340 HS2ST1Q7LGA3 356 aa28.23■■■□□ 2.11
CPNE1-216ENST00000437340 DAW1Q8N136 415 aa28.23■■■□□ 2.11
CPNE1-216ENST00000437340 CDHR1Q96JP9 859 aa28.23■■■□□ 2.11
CPNE1-216ENST00000437340 LSM14BQ9BX40 385 aaKnown RBP28.23■■■□□ 2.11
CPNE1-216ENST00000437340 LARSQ9P2J5 1176 aaKnown RBP28.23■■■□□ 2.11
CPNE1-216ENST00000437340 LOC285556D6RIA3 1793 aa28.23■■■□□ 2.11
CPNE1-216ENST00000437340 AFPP02771 609 aaKnown RBP28.22■■■□□ 2.11
CPNE1-216ENST00000437340 YWHABP31946 246 aaKnown RBP28.22■■■□□ 2.11
CPNE1-216ENST00000437340 NAA30Q147X3 362 aaPredicted RBP28.22■■■□□ 2.11
CPNE1-216ENST00000437340 MNS1Q8NEH6 495 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 CHST13Q8NET6 341 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 A1CFQ9NQ94 594 aaKnown RBP28.22■■■□□ 2.11
CPNE1-216ENST00000437340 ANKEF1Q9NU02 776 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 ARHGAP20Q9P2F6 1191 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 CTAGE9A4FU28 777 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 KRT86O43790 486 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 PPP1R37O75864 691 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 LCA5LO95447 670 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 ZC2HC1CQ53FD0 456 aaPredicted RBP28.22■■■□□ 2.11
CPNE1-216ENST00000437340 ARMC9Q7Z3E5 817 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 EHBP1Q8NDI1 1231 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 GBP3Q9H0R5 595 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 PDCL3Q9H2J4 239 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 ZNF408Q9H9D4 720 aa28.22■■■□□ 2.11
CPNE1-216ENST00000437340 SSU72P8A0A1W2PR75 194 aa28.21■■■□□ 2.11
CPNE1-216ENST00000437340 CCNE2O96020 404 aa28.21■■■□□ 2.11
CPNE1-216ENST00000437340 KIAA1328Q86T90 577 aa28.21■■■□□ 2.11
CPNE1-216ENST00000437340 SLC35F6Q8N357 371 aa28.21■■■□□ 2.11
CPNE1-216ENST00000437340 PLCB1Q9NQ66 1216 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms