RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 IPO9Q96P70 1041 aaKnown RBP5.2□□□□□ -1.58
HMGB1P31-201ENST00000437242 PLA2G3Q9NZ20 509 aa5.2□□□□□ -1.58
HMGB1P31-201ENST00000437242 BTBD7Q9P203 1132 aa5.2□□□□□ -1.58
HMGB1P31-201ENST00000437242 Q9UFV3 132 aa5.2□□□□□ -1.58
HMGB1P31-201ENST00000437242 FAM184BQ9ULE4 1060 aa5.2□□□□□ -1.58
HMGB1P31-201ENST00000437242 A0A087X1B8 175 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 TRBV23-1A0A0A0MS06 115 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 ZNF561-AS1K7EIQ3 104 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 KCNK3O14649 394 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 CLASP2O75122 1294 aaKnown RBP5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 MAKP20794 623 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 ECE1P42892 770 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 JAM2P57087 298 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 CD83Q01151 205 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 GRM7Q14831 915 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 SGMS1Q86VZ5 419 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 D2HGDHQ8N465 521 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 SLC43A3Q8NBI5 491 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 GMLQ99445 158 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 OR10A5Q9H207 317 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 UCKL1Q9NWZ5 548 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 GIT1Q9Y2X7 761 aa5.19□□□□□ -1.58
HMGB1P31-201ENST00000437242 CCDC66A2RUB6 948 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 CAPN14A8MX76 684 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 U2SURPO15042 1029 aaKnown RBP5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 CYP27B1O15528 508 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 MPIG6BO95866 241 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 DNM2P50570 870 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 KRTAP1-1Q07627 177 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 KANK2Q63ZY3 851 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 TMEM200BQ69YZ2 307 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 TRIM68Q6AZZ1 485 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 LRSAM1Q6UWE0 723 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 SPATC1Q76KD6 591 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 ADGRE4PQ86SQ3 457 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 ZC3H7AQ8IWR0 971 aaKnown RBP5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 GPR135Q8IZ08 494 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 SHCBP1Q8NEM2 672 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 TMEM176AQ96HP8 235 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 AMNQ9BXJ7 453 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 MMRN2Q9H8L6 949 aa5.18□□□□□ -1.58
HMGB1P31-201ENST00000437242 SLC26A4O43511 780 aa5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 ADCY3O60266 1144 aa5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 APPP05067 770 aa5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 MMEP08473 750 aa5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 C6orf222P0C671 652 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 GABREP78334 506 aa5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 SSRP1Q08945 709 aaKnown RBP5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 CRHR2Q13324 411 aa5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 MOGSQ13724 837 aa5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 MTERF2Q49AM1 385 aa5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 GRAMD4Q6IC98 578 aa5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 CISD2Q8N5K1 135 aaKnown RBP5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 SMURF1Q9HCE7 757 aa5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 REXO2Q9Y3B8 237 aaKnown RBP5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 PCDHA9Q9Y5H5 950 aa5.17□□□□□ -1.58
HMGB1P31-201ENST00000437242 PDPK1O15530 556 aa5.16□□□□□ -1.58
HMGB1P31-201ENST00000437242 STAT5BP51692 787 aa5.16□□□□□ -1.58
HMGB1P31-201ENST00000437242 HGFACQ04756 655 aa5.16□□□□□ -1.58
HMGB1P31-201ENST00000437242 FAM209AQ5JX71 171 aa5.16□□□□□ -1.58
HMGB1P31-201ENST00000437242 FNDC7Q5VTL7 733 aa5.16□□□□□ -1.58
HMGB1P31-201ENST00000437242 CKAP2LQ8IYA6 745 aa5.16□□□□□ -1.58
HMGB1P31-201ENST00000437242 THEMISQ8N1K5 641 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P31-201ENST00000437242 HIPK4Q8NE63 616 aa5.16□□□□□ -1.58
HMGB1P31-201ENST00000437242 ZNF703Q9H7S9 590 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P31-201ENST00000437242 PARPBPQ9NWS1 579 aa5.16□□□□□ -1.58
HMGB1P31-201ENST00000437242 PFDN2Q9UHV9 154 aa5.16□□□□□ -1.58
HMGB1P31-201ENST00000437242 SCDO00767 359 aa5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 STK10O94804 968 aaKnown RBP5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 CRTAMO95727 393 aa5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 LACTBP83111 547 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 RIN1Q13671 783 aa5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 FOXB2Q5VYV0 432 aa5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 LDLRAD3Q86YD5 345 aa5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 TMPRSS6Q8IU80 811 aa5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 ZBTB38Q8NAP3 1195 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 ASB15Q8WXK1 588 aa5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 LARP4BQ92615 738 aaKnown RBP5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 CLIP3Q96DZ5 547 aa5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 KCNH7Q9NS40 1196 aa5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 CEP72Q9P209 647 aa5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 MSRB2Q9Y3D2 182 aa5.15□□□□□ -1.59
HMGB1P31-201ENST00000437242 A0A1W2PRX2 142 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 PRAMEF22A3QJZ6 481 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 PMS2P1A4D2B8 440 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 CCDC85CA6NKD9 419 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 FOXP2O15409 715 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 PPFIA2O75334 1257 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 NANOS3P60323 173 aaKnown RBP5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 MAP3K12Q12852 859 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 RASGRF1Q13972 1273 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 SEC23AQ15436 765 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 MRGPRGQ86SM5 289 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 NOSTRINQ8IVI9 506 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 CALML6Q8TD86 181 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 EXOC2Q96KP1 924 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 GBP4Q96PP9 640 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 MPHOSPH9Q99550 1183 aa5.14□□□□□ -1.59
HMGB1P31-201ENST00000437242 APEX1P27695 318 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms