RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 BIRC3Q13489 604 aa7.93□□□□□ -1.14
GARNL3-205ENST00000435213 ZNF827Q17R98 1081 aa7.93□□□□□ -1.14
GARNL3-205ENST00000435213 TMEM259Q4ZIN3 620 aa7.93□□□□□ -1.14
GARNL3-205ENST00000435213 GLE1Q53GS7 698 aaKnown RBP7.93□□□□□ -1.14
GARNL3-205ENST00000435213 CAPN12Q6ZSI9 719 aa7.93□□□□□ -1.14
GARNL3-205ENST00000435213 TRAPPC11Q7Z392 1133 aa7.93□□□□□ -1.14
GARNL3-205ENST00000435213 TBC1D1Q86TI0 1168 aaPredicted RBP7.93□□□□□ -1.14
GARNL3-205ENST00000435213 SPERTQ8NA61 448 aa7.93□□□□□ -1.14
GARNL3-205ENST00000435213 CCT6BQ92526 530 aa7.93□□□□□ -1.14
GARNL3-205ENST00000435213 RNF25Q96BH1 459 aaPredicted RBP7.93□□□□□ -1.14
GARNL3-205ENST00000435213 SEC16BQ96JE7 1060 aa7.93□□□□□ -1.14
GARNL3-205ENST00000435213 TIPINQ9BVW5 301 aa7.93□□□□□ -1.14
GARNL3-205ENST00000435213 FOXP1Q9H334 677 aaPredicted RBP7.93□□□□□ -1.14
GARNL3-205ENST00000435213 UBR2Q8IWV8 1755 aa7.93□□□□□ -1.14
GARNL3-205ENST00000435213 PSMD14O00487 310 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 GPAA1O43292 621 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 SGTAO43765 313 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 CLASP2O75122 1294 aaKnown RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 TUBP50607 506 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 NNTQ13423 1086 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 SLC39A6Q13433 755 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 CFAP58Q5T655 872 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 RUBCNQ92622 972 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 ABHD10Q9NUJ1 306 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 MAP3K13O43283 966 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 MAP3K7O43318 606 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 RANBP6O60518 1105 aaKnown RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 PARNO95453 639 aaKnown RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 ASLP04424 464 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 POTEJP0CG39 1038 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 ACADSP16219 412 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 PIP4K2AP48426 406 aaPredicted RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 ZNF131P52739 623 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 SEC24CP53992 1094 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 ERVK-24P63145 666 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 GUCY1A3Q02108 690 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 FKBP4Q02790 459 aaKnown RBP eCLIP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 SPAG1Q07617 926 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 FKBP15Q5T1M5 1219 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 C3orf62Q6ZUJ4 267 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 CYB5R4Q7L1T6 521 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 PHKBQ93100 1093 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 AZIN2Q96A70 460 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 RNPC3Q96LT9 517 aaKnown RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 HAPLN3Q96S86 360 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 IFT122Q9HBG6 1241 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 LIMA1Q9UHB6 759 aaKnown RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 SAP30BPQ9UHR5 308 aaKnown RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 LNPEPQ9UIQ6 1025 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 ATP5J2-PTCD1G3V325 749 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 PTCD1O75127 700 aaKnown RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 NR1D1P20393 614 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 TOB1P50616 345 aaPredicted RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 FXR1P51114 621 aaKnown RBP eCLIP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 MUM1Q2TAK8 710 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 SYDE2Q5VT97 1194 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 CCNI2Q6ZMN8 369 aaPredicted RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 ZNF662Q6ZS27 426 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 LONP2Q86WA8 852 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 PALB2Q86YC2 1186 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 RBM46Q8TBY0 533 aaKnown RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 ZNF496Q96IT1 587 aaPredicted RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 HAUS4Q9H6D7 363 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 BTBD7Q9P203 1132 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 FAM32AQ9Y421 112 aaKnown RBP7.92□□□□□ -1.14
GARNL3-205ENST00000435213 PCDHB2Q9Y5E7 798 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 USH1CQ9Y6N9 552 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 DOCK2Q92608 1830 aa7.92□□□□□ -1.14
GARNL3-205ENST00000435213 CCT8L1PA6NM43 557 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 IFNAR1P17181 557 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 SLC16A2P36021 539 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 PPP4CP60510 307 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 HPCAP84074 193 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 ZNF362Q5T0B9 420 aaPredicted RBP7.91□□□□□ -1.14
GARNL3-205ENST00000435213 FAM117BQ6P1L5 589 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 SH3RF1Q7Z6J0 888 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 MICU3Q86XE3 530 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 SIX5Q8N196 739 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 CPLX3Q8WVH0 158 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 IFT74Q96LB3 600 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 CENPKQ9BS16 269 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 PPP1R12CQ9BZL4 782 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 TPK1Q9H3S4 243 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 ARHGEF38Q9NXL2 777 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 MAFFQ9ULX9 164 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 ZNF652Q9Y2D9 606 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 ARAP2Q8WZ64 1704 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 LIFRP42702 1097 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 COX10Q12887 443 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 CYLC2Q14093 348 aaPredicted RBP7.91□□□□□ -1.14
GARNL3-205ENST00000435213 CHRNA2Q15822 529 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 DDB1Q16531 1140 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 LRRC24Q50LG9 513 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 PAPD7Q5XG87 772 aaKnown RBP7.91□□□□□ -1.14
GARNL3-205ENST00000435213 NCAPH2Q6IBW4 605 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 TBC1D10CQ8IV04 446 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 TTC5Q8N0Z6 440 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 PMM1Q92871 262 aa7.91□□□□□ -1.14
GARNL3-205ENST00000435213 ITPKCQ96DU7 683 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms