RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 CENPCQ03188 943 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 DMTNQ08495 405 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 MAN2A1Q16706 1144 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 HSP90AA4PQ58FG1 418 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 FKBP15Q5T1M5 1219 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 C9orf131Q5VYM1 1079 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 TMCO3Q6UWJ1 677 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 BTNL9Q6UXG8 535 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 TMEM179Q6ZVK1 233 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 ZC3H3Q8IXZ2 948 aaKnown RBP8.25□□□□□ -1.09
COL17A1-204ENST00000433822 SLFN12Q8IYM2 578 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 ADGRF4Q8IZF3 695 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 PGBD3Q8N328 593 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 MSANTD4Q8NCY6 345 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 LRRC15Q8TF66 581 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 CRYGNQ8WXF5 182 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 ABHD8Q96I13 439 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 CDK5RAP3Q96JB5 506 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 CEP63Q96MT8 703 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 GPR101Q96P66 508 aaPredicted RBP8.25□□□□□ -1.09
COL17A1-204ENST00000433822 NAPGQ99747 312 aaPredicted RBP8.25□□□□□ -1.09
COL17A1-204ENST00000433822 CARD6Q9BX69 1037 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 VPS16Q9H269 839 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 USP40Q9NVE5 1235 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 PI4KBQ9UBF8 816 aa8.25□□□□□ -1.09
COL17A1-204ENST00000433822 TTC26A0AVF1 554 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 FRMD3A2A2Y4 597 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 PP2D1A8MPX8 630 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 KRT86O43790 486 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 IPO7O95373 1038 aaKnown RBP8.24□□□□□ -1.09
COL17A1-204ENST00000433822 LCA5LO95447 670 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 MUTP22033 750 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 MCM3P25205 808 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 CDC25AP30304 524 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 CIITAP33076 1130 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 TECP42680 631 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 PHKA2P46019 1235 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 CRKP46108 304 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 AMPD2Q01433 879 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 ITIH3Q06033 890 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 GOLGA8FQ08AF8 430 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 GOLGA8DPQ0D2H9 430 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 TBC1D8BQ0IIM8 1120 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 STK4Q13043 487 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 NAA30Q147X3 362 aaPredicted RBP8.24□□□□□ -1.09
COL17A1-204ENST00000433822 MTF1Q14872 753 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 ZCWPW2Q504Y3 356 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 MIIPQ5JXC2 388 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 PAPD7Q5XG87 772 aaKnown RBP8.24□□□□□ -1.09
COL17A1-204ENST00000433822 LINC00114Q6XXX2 140 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 KIAA0895Q8NCT3 520 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 SUPT20HQ8NEM7 779 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 SYN2Q92777 582 aaPredicted RBP8.24□□□□□ -1.09
COL17A1-204ENST00000433822 CNOT6LQ96LI5 555 aaKnown RBP8.24□□□□□ -1.09
COL17A1-204ENST00000433822 PNMA5Q96PV4 448 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 TSG101Q99816 390 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 UBXN6Q9BZV1 441 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 GBP3Q9H0R5 595 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 KCNMB3Q9NPA1 279 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 RAB6BQ9NRW1 208 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 BIN2Q9UBW5 565 aaPredicted RBP8.24□□□□□ -1.09
COL17A1-204ENST00000433822 ATXN7L1Q9ULK2 861 aaPredicted RBP8.24□□□□□ -1.09
COL17A1-204ENST00000433822 PLAGL2Q9UPG8 496 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 BCS1LQ9Y276 419 aa8.24□□□□□ -1.09
COL17A1-204ENST00000433822 SSU72P8A0A1W2PR75 194 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 TRIM49BA6NDI0 452 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 MYMKA6NI61 221 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 PIK3CDO00329 1044 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 GNB5O14775 395 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 PLA2G6O60733 806 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 PNMA6AP0CW24 399 aaPredicted RBP8.23□□□□□ -1.09
COL17A1-204ENST00000433822 BMP4P12644 408 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 PRLRP16471 622 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 TRIM21P19474 475 aaKnown RBP8.23□□□□□ -1.09
COL17A1-204ENST00000433822 ANXA13P27216 316 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 CHMP4BP1P59074 171 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 FKBP3Q00688 224 aaKnown RBP8.23□□□□□ -1.09
COL17A1-204ENST00000433822 MLLT1Q03111 559 aaPredicted RBP8.23□□□□□ -1.09
COL17A1-204ENST00000433822 NR1H3Q13133 447 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 UBAP2LQ14157 1087 aaKnown RBP8.23□□□□□ -1.09
COL17A1-204ENST00000433822 EDRF1Q3B7T1 1238 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 Q4G0T1 1027 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 VWA3BQ502W6 1294 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 EFHC2Q5JST6 749 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 GNASQ5JWF2 1037 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 DACT2Q5SW24 774 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 HAUS3Q68CZ6 603 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 ANKRD40Q6AI12 368 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 WDR59Q6PJI9 974 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 SLCO4C1Q6ZQN7 724 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 LRRC55Q6ZSA7 311 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 TRAPPC11Q7Z392 1133 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 ZNF572Q7Z3I7 529 aaPredicted RBP8.23□□□□□ -1.09
COL17A1-204ENST00000433822 SMC1BQ8NDV3 1235 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 SNX29Q8TEQ0 813 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 HAS1Q92839 578 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 DNAJC19Q96DA6 116 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 FAM20AQ96MK3 541 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 DESI2Q9BSY9 194 aa8.23□□□□□ -1.09
COL17A1-204ENST00000433822 MXD3Q9BW11 206 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms