RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 CEP170P1Q96L14 293 aa29.44■■■□□ 2.3
TMEM248-205ENST00000433271 SPC25Q9HBM1 224 aa29.44■■■□□ 2.3
TMEM248-205ENST00000433271 CCDC192P0DO97 292 aa29.43■■■□□ 2.3
TMEM248-205ENST00000433271 NPEPPSP55786 919 aa29.43■■■□□ 2.3
TMEM248-205ENST00000433271 FUCA2Q9BTY2 467 aa29.43■■■□□ 2.3
TMEM248-205ENST00000433271 CYP26B1Q9NR63 512 aa29.43■■■□□ 2.3
TMEM248-205ENST00000433271 RMND1Q9NWS8 449 aa29.43■■■□□ 2.3
TMEM248-205ENST00000433271 ZNF215Q9UL58 517 aaPredicted RBP29.43■■■□□ 2.3
TMEM248-205ENST00000433271 PVALEFA0A1B0GWK0 134 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 KLRC4O43908 158 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 KRT18P05783 430 aaKnown RBP29.42■■■□□ 2.3
TMEM248-205ENST00000433271 ZNF286BP0CG31 522 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 MARK3P27448 753 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 CTCFP49711 727 aaPredicted RBP29.42■■■□□ 2.3
TMEM248-205ENST00000433271 PLCB4Q15147 1175 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 LRSAM1Q6UWE0 723 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 TRIML1Q8N9V2 468 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 HMX1Q9NP08 348 aaPredicted RBP29.42■■■□□ 2.3
TMEM248-205ENST00000433271 DDX20Q9UHI6 824 aaKnown RBP29.42■■■□□ 2.3
TMEM248-205ENST00000433271 MAN1B1Q9UKM7 699 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 SYNRGQ9UMZ2 1314 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 NPHP3-ACAD11A0A0J9YXS1 232 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 H3BRB1 525 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 BIN1O00499 593 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 HSPA1AP0DMV8 641 aaKnown RBP29.42■■■□□ 2.3
TMEM248-205ENST00000433271 HSPA1BP0DMV9 641 aaKnown RBP29.42■■■□□ 2.3
TMEM248-205ENST00000433271 GUCY2CP25092 1073 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 TYRO3Q06418 890 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 GIT2Q14161 759 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 KCNB1Q14721 858 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 UNC13DQ70J99 1090 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 SH2D3AQ9BRG2 576 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 TUT1Q9H6E5 874 aaKnown RBP29.42■■■□□ 2.3
TMEM248-205ENST00000433271 XPNPEP3Q9NQH7 507 aa29.42■■■□□ 2.3
TMEM248-205ENST00000433271 MSCO60682 206 aa29.41■■■□□ 2.3
TMEM248-205ENST00000433271 C6orf222P0C671 652 aaPredicted RBP29.41■■■□□ 2.3
TMEM248-205ENST00000433271 LBX1P52954 281 aa29.41■■■□□ 2.3
TMEM248-205ENST00000433271 IRX5P78411 483 aaPredicted RBP29.41■■■□□ 2.3
TMEM248-205ENST00000433271 BEX3Q00994 111 aa29.41■■■□□ 2.3
TMEM248-205ENST00000433271 KPNA6O60684 536 aa29.4■■■□□ 2.3
TMEM248-205ENST00000433271 TARBP2Q15633 366 aaKnown RBP29.4■■■□□ 2.3
TMEM248-205ENST00000433271 CTU1Q7Z7A3 348 aaKnown RBP29.4■■■□□ 2.3
TMEM248-205ENST00000433271 SH3TC2Q8TF17 1288 aa29.4■■■□□ 2.3
TMEM248-205ENST00000433271 CCDC47Q96A33 483 aaKnown RBP29.4■■■□□ 2.3
TMEM248-205ENST00000433271 REEP2Q9BRK0 252 aa29.4■■■□□ 2.3
TMEM248-205ENST00000433271 RNPEPQ9H4A4 650 aa29.4■■■□□ 2.3
TMEM248-205ENST00000433271 PPME1Q9Y570 386 aa29.4■■■□□ 2.3
TMEM248-205ENST00000433271 HBP1O60381 514 aa29.39■■■□□ 2.3
TMEM248-205ENST00000433271 PGK1P00558 417 aa29.39■■■□□ 2.3
TMEM248-205ENST00000433271 IDEP14735 1019 aa29.39■■■□□ 2.3
TMEM248-205ENST00000433271 RAD51AP2Q09MP3 1159 aa29.39■■■□□ 2.3
TMEM248-205ENST00000433271 MORC3Q14149 939 aa29.39■■■□□ 2.3
TMEM248-205ENST00000433271 MTERF2Q49AM1 385 aa29.39■■■□□ 2.3
TMEM248-205ENST00000433271 KMT5BQ4FZB7 885 aa29.39■■■□□ 2.3
TMEM248-205ENST00000433271 GNASQ5JWF2 1037 aa29.39■■■□□ 2.3
TMEM248-205ENST00000433271 TIPINQ9BVW5 301 aa29.39■■■□□ 2.3
TMEM248-205ENST00000433271 ADAMTS4O75173 837 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 DGAT1O75907 488 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 RHOBTB3O94955 611 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 F2P00734 622 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 NLRP12P59046 1061 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 SLC9C1Q4G0N8 1177 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 ISM2Q6H9L7 571 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 CCDC65Q8IXS2 484 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 PANK4Q9NVE7 773 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 ANO10Q9NW15 660 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 ODF2LQ9ULJ1 636 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 TRPC6Q9Y210 931 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 FRMD3A2A2Y4 597 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 USO1O60763 962 aaKnown RBP29.38■■■□□ 2.29
TMEM248-205ENST00000433271 STX1AQ16623 288 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 CEP89Q96ST8 783 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 EXOC1Q9NV70 894 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 CENPFP49454 3210 aa29.38■■■□□ 2.29
TMEM248-205ENST00000433271 MYADML2A6NDP7 307 aa29.37■■■□□ 2.29
TMEM248-205ENST00000433271 ZEB2O60315 1214 aa29.37■■■□□ 2.29
TMEM248-205ENST00000433271 MYL3P08590 195 aa29.37■■■□□ 2.29
TMEM248-205ENST00000433271 CACNB1Q02641 598 aaPredicted RBP29.37■■■□□ 2.29
TMEM248-205ENST00000433271 PDLIM7Q9NR12 457 aa29.37■■■□□ 2.29
TMEM248-205ENST00000433271 BMP6P22004 513 aa29.36■■■□□ 2.29
TMEM248-205ENST00000433271 RFC5P40937 340 aa29.36■■■□□ 2.29
TMEM248-205ENST00000433271 EHHADHQ08426 723 aa29.36■■■□□ 2.29
TMEM248-205ENST00000433271 KLHDC9Q8NEP7 349 aa29.36■■■□□ 2.29
TMEM248-205ENST00000433271 KAT2BQ92831 832 aa29.36■■■□□ 2.29
TMEM248-205ENST00000433271 GTPBP4Q9BZE4 634 aaKnown RBP29.36■■■□□ 2.29
TMEM248-205ENST00000433271 COL4A3BPQ9Y5P4 624 aa29.36■■■□□ 2.29
TMEM248-205ENST00000433271 ZBTB42B2RXF5 422 aa29.35■■■□□ 2.29
TMEM248-205ENST00000433271 TBCAO75347 108 aaKnown RBP29.35■■■□□ 2.29
TMEM248-205ENST00000433271 CST5P28325 142 aaPredicted RBP29.35■■■□□ 2.29
TMEM248-205ENST00000433271 PURAQ00577 322 aaKnown RBP29.35■■■□□ 2.29
TMEM248-205ENST00000433271 ZNF484Q5JVG2 852 aa29.35■■■□□ 2.29
TMEM248-205ENST00000433271 MCPH1Q8NEM0 835 aa29.35■■■□□ 2.29
TMEM248-205ENST00000433271 TSPY26PQ9H489 355 aa29.35■■■□□ 2.29
TMEM248-205ENST00000433271 DHX33Q9H6R0 707 aaKnown RBP29.35■■■□□ 2.29
TMEM248-205ENST00000433271 POLGP54098 1239 aaPredicted RBP29.34■■■□□ 2.29
TMEM248-205ENST00000433271 COASYQ13057 564 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 PSMD2Q13200 908 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 ZNF658Q5TYW1 1059 aaPredicted RBP29.34■■■□□ 2.29
TMEM248-205ENST00000433271 LHX8Q68G74 356 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 EXOC8Q8IYI6 725 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms