RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 GPR20Q99678 358 aa4.97□□□□□ -1.61
CLK1-204ENST00000432425 ZDHHC5Q9C0B5 715 aa4.97□□□□□ -1.61
CLK1-204ENST00000432425 PCIF1Q9H4Z3 704 aa4.97□□□□□ -1.61
CLK1-204ENST00000432425 SEC61A2Q9H9S3 476 aa4.97□□□□□ -1.61
CLK1-204ENST00000432425 MAGEC2Q9UBF1 373 aaPredicted RBP4.97□□□□□ -1.61
CLK1-204ENST00000432425 PTPDC1A2A3K4 754 aa4.96□□□□□ -1.61
CLK1-204ENST00000432425 H7C1D1 291 aa4.96□□□□□ -1.61
CLK1-204ENST00000432425 JMJD7P0C870 316 aa4.96□□□□□ -1.61
CLK1-204ENST00000432425 SDSP20132 328 aa4.96□□□□□ -1.61
CLK1-204ENST00000432425 KIF11P52732 1056 aa4.96□□□□□ -1.61
CLK1-204ENST00000432425 ADAM17P78536 824 aa4.96□□□□□ -1.61
CLK1-204ENST00000432425 ZNF174Q15697 407 aa4.96□□□□□ -1.61
CLK1-204ENST00000432425 CFAP100Q494V2 611 aa4.96□□□□□ -1.61
CLK1-204ENST00000432425 E2F7Q96AV8 911 aa4.96□□□□□ -1.61
CLK1-204ENST00000432425 C8orf49Q96NF6 230 aa4.96□□□□□ -1.61
CLK1-204ENST00000432425 LMF1Q96S06 567 aa4.96□□□□□ -1.61
CLK1-204ENST00000432425 SSBP3Q9BWW4 388 aaPredicted RBP4.96□□□□□ -1.61
CLK1-204ENST00000432425 PTPN22Q9Y2R2 807 aa4.96□□□□□ -1.61
CLK1-204ENST00000432425 A0A0G2JNJ9 132 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 RASSF10A6NK89 507 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 GOLGA6L22H0YM25 854 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 FNTBP49356 437 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 NFKB2Q00653 900 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 CD83Q01151 205 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 CDCA2Q69YH5 1023 aaPredicted RBP4.96□□□□□ -1.62
CLK1-204ENST00000432425 DBX2Q6ZNG2 339 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 C16orf86Q6ZW13 317 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 LRRC37BQ96QE4 947 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 PTPN18Q99952 460 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 MEGF9Q9H1U4 602 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 ACSS2Q9NR19 701 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 INTS7Q9NVH2 962 aaKnown RBP4.96□□□□□ -1.62
CLK1-204ENST00000432425 FANCLQ9NW38 375 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 Q9UFV3 132 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 ST6GALNAC2Q9UJ37 374 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 CDC42EP3Q9UKI2 254 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 CD2APQ9Y5K6 639 aa4.96□□□□□ -1.62
CLK1-204ENST00000432425 GPR42O15529 346 aa4.95□□□□□ -1.62
CLK1-204ENST00000432425 APEX1P27695 318 aaKnown RBP4.95□□□□□ -1.62
CLK1-204ENST00000432425 MEOX1P50221 254 aa4.95□□□□□ -1.62
CLK1-204ENST00000432425 RAC3P60763 192 aa4.95□□□□□ -1.62
CLK1-204ENST00000432425 MOGSQ13724 837 aa4.95□□□□□ -1.62
CLK1-204ENST00000432425 KANK2Q63ZY3 851 aa4.95□□□□□ -1.62
CLK1-204ENST00000432425 GRAMD4Q6IC98 578 aa4.95□□□□□ -1.62
CLK1-204ENST00000432425 RTKN2Q8IZC4 609 aa4.95□□□□□ -1.62
CLK1-204ENST00000432425 FOXB1Q99853 325 aa4.95□□□□□ -1.62
CLK1-204ENST00000432425 B4GALT6Q9UBX8 382 aa4.95□□□□□ -1.62
CLK1-204ENST00000432425 CBX4O00257 560 aa4.94□□□□□ -1.62
CLK1-204ENST00000432425 TRAF5O00463 557 aa4.94□□□□□ -1.62
CLK1-204ENST00000432425 CDC45O75419 566 aa4.94□□□□□ -1.62
CLK1-204ENST00000432425 ALDH6A1Q02252 535 aaKnown RBP4.94□□□□□ -1.62
CLK1-204ENST00000432425 MAP3K12Q12852 859 aa4.94□□□□□ -1.62
CLK1-204ENST00000432425 ICAM4Q14773 271 aa4.94□□□□□ -1.62
CLK1-204ENST00000432425 EIF4HQ15056 248 aaKnown RBP4.94□□□□□ -1.62
CLK1-204ENST00000432425 C21orf62-AS1Q17RA5 79 aa4.94□□□□□ -1.62
CLK1-204ENST00000432425 TMEM200BQ69YZ2 307 aa4.94□□□□□ -1.62
CLK1-204ENST00000432425 KIAA1958Q8N8K9 716 aa4.94□□□□□ -1.62
CLK1-204ENST00000432425 GIMAP8Q8ND71 665 aaPredicted RBP4.94□□□□□ -1.62
CLK1-204ENST00000432425 NEIL1Q96FI4 390 aaPredicted RBP4.94□□□□□ -1.62
CLK1-204ENST00000432425 KIAA1683Q9H0B3 1180 aa4.94□□□□□ -1.62
CLK1-204ENST00000432425 NR2E1Q9Y466 385 aa4.94□□□□□ -1.62
CLK1-204ENST00000432425 CYP17A1P05093 508 aa4.93□□□□□ -1.62
CLK1-204ENST00000432425 ZNF20P17024 532 aa4.93□□□□□ -1.62
CLK1-204ENST00000432425 NEK4P51957 841 aa4.93□□□□□ -1.62
CLK1-204ENST00000432425 RNF151Q2KHN1 245 aa4.93□□□□□ -1.62
CLK1-204ENST00000432425 RTN4RL1Q86UN2 441 aaPredicted RBP4.93□□□□□ -1.62
CLK1-204ENST00000432425 DVL3Q92997 716 aaPredicted RBP4.93□□□□□ -1.62
CLK1-204ENST00000432425 GNRHR2Q96P88 292 aa4.93□□□□□ -1.62
CLK1-204ENST00000432425 KRTAP9-3Q9BYQ3 159 aa4.93□□□□□ -1.62
CLK1-204ENST00000432425 DEF6Q9H4E7 631 aa4.93□□□□□ -1.62
CLK1-204ENST00000432425 USP35Q9P2H5 1018 aa4.93□□□□□ -1.62
CLK1-204ENST00000432425 ZKSCAN5Q9Y2L8 839 aa4.93□□□□□ -1.62
CLK1-204ENST00000432425 MRPL42Q9Y6G3 142 aaKnown RBP4.93□□□□□ -1.62
CLK1-204ENST00000432425 UBA6A0AVT1 1052 aaPredicted RBP4.92□□□□□ -1.62
CLK1-204ENST00000432425 ARHGAP6O43182 974 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 KPNA6O60684 536 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 KRTAP10-2P60368 255 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 SLC6A3Q01959 620 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 ROM1Q03395 351 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 PCOLCEQ15113 449 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 TKFCQ3LXA3 575 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 CNNM4Q6P4Q7 775 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 LARP4Q71RC2 724 aaKnown RBP eCLIP4.92□□□□□ -1.62
CLK1-204ENST00000432425 FILIP1Q7Z7B0 1213 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 NINJ1Q92982 152 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 FOXRED1Q96CU9 486 aaPredicted RBP4.92□□□□□ -1.62
CLK1-204ENST00000432425 C12orf65Q9H3J6 166 aaKnown RBP4.92□□□□□ -1.62
CLK1-204ENST00000432425 FAM184BQ9ULE4 1060 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 TCAF1Q9Y4C2 921 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 PATE3B3GLJ2 98 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 DVL2O14641 736 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 GAS7O60861 476 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 MAFO75444 373 aaPredicted RBP4.92□□□□□ -1.62
CLK1-204ENST00000432425 PRLP01236 227 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 INSRRP14616 1297 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 MRE11P49959 708 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 NFYCQ13952 458 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 ZXDCQ2QGD7 858 aaPredicted RBP4.92□□□□□ -1.62
CLK1-204ENST00000432425 HS1BP3Q53T59 392 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 TTC38Q5R3I4 469 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms