RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 TTC26A0AVF1 554 aa29.34■■■□□ 2.29
SH3GL3-202ENST00000427482 CETN3O15182 167 aa29.34■■■□□ 2.29
SH3GL3-202ENST00000427482 NR2F2P24468 414 aa29.34■■■□□ 2.29
SH3GL3-202ENST00000427482 ODR4Q5SWX8 454 aa29.34■■■□□ 2.29
SH3GL3-202ENST00000427482 ZNF720Q7Z2F6 126 aa29.34■■■□□ 2.29
SH3GL3-202ENST00000427482 RETREG2Q8NC44 543 aa29.34■■■□□ 2.29
SH3GL3-202ENST00000427482 CCDC43Q96MW1 224 aaKnown RBP29.34■■■□□ 2.29
SH3GL3-202ENST00000427482 TTYH3Q9C0H2 523 aa29.34■■■□□ 2.29
SH3GL3-202ENST00000427482 CAPN11Q9UMQ6 739 aa29.34■■■□□ 2.29
SH3GL3-202ENST00000427482 ZMYM2Q9UBW7 1377 aa29.33■■■□□ 2.29
SH3GL3-202ENST00000427482 TNNT1P13805 278 aa29.33■■■□□ 2.29
SH3GL3-202ENST00000427482 KRT9P35527 623 aa29.33■■■□□ 2.29
SH3GL3-202ENST00000427482 STXBP4Q6ZWJ1 553 aa29.33■■■□□ 2.29
SH3GL3-202ENST00000427482 R3HDMLQ9H3Y0 253 aa29.33■■■□□ 2.29
SH3GL3-202ENST00000427482 RASSF10A6NK89 507 aa29.32■■■□□ 2.28
SH3GL3-202ENST00000427482 BACH1O14867 736 aa29.32■■■□□ 2.28
SH3GL3-202ENST00000427482 PSAPP07602 524 aa29.32■■■□□ 2.28
SH3GL3-202ENST00000427482 PTPN14Q15678 1187 aa29.32■■■□□ 2.28
SH3GL3-202ENST00000427482 Q3C1V9 767 aa29.32■■■□□ 2.28
SH3GL3-202ENST00000427482 TIPINQ9BVW5 301 aa29.32■■■□□ 2.28
SH3GL3-202ENST00000427482 USO1O60763 962 aaKnown RBP29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 KLK7P49862 253 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 ACTR2P61160 394 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 KCNA1Q09470 495 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 FIGNQ5HY92 759 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 TRIM59Q8IWR1 403 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 ATP6V0A1Q93050 837 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 GABBR1Q9UBS5 961 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 SIK3Q9Y2K2 1263 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 LUC7L2Q9Y383 392 aaKnown RBP29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 TMEM150BA6NC51 233 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 DKC1O60832 514 aaKnown RBP eCLIP29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 FKBP1BP68106 108 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 SP2Q02086 613 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 ZC2HC1CQ53FD0 456 aaPredicted RBP29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 UTP14CQ5TAP6 766 aaKnown RBP29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 IQCDQ96DY2 449 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 PNMA3Q9UL41 463 aa29.31■■■□□ 2.28
SH3GL3-202ENST00000427482 SOWAHDA6NJG2 315 aa29.3■■■□□ 2.28
SH3GL3-202ENST00000427482 TGFB1I1O43294 461 aa29.3■■■□□ 2.28
SH3GL3-202ENST00000427482 XKR9Q5GH70 373 aa29.3■■■□□ 2.28
SH3GL3-202ENST00000427482 ABHD15Q6UXT9 468 aa29.3■■■□□ 2.28
SH3GL3-202ENST00000427482 TOGARAM2Q6ZUX3 1019 aa29.3■■■□□ 2.28
SH3GL3-202ENST00000427482 DNAJC7Q99615 494 aa29.3■■■□□ 2.28
SH3GL3-202ENST00000427482 STRA6Q9BX79 667 aa29.3■■■□□ 2.28
SH3GL3-202ENST00000427482 PPP2R2CQ9Y2T4 447 aa29.3■■■□□ 2.28
SH3GL3-202ENST00000427482 TELO2Q9Y4R8 837 aa29.3■■■□□ 2.28
SH3GL3-202ENST00000427482 ZSCAN12O43309 604 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 PPP1R37O75864 691 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 NR3C1P04150 777 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 MAPTP10636 758 aaKnown RBP29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 TRIM21P19474 475 aaKnown RBP29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 NFIL3Q16649 462 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 PLA2G4FQ68DD2 849 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 SEPT14Q6ZU15 432 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 ANO5Q75V66 913 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 PCMTD1Q96MG8 357 aaPredicted RBP29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 LARSQ9P2J5 1176 aaKnown RBP29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 PCDHB13Q9Y5F0 798 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 ZNF862O60290 1169 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 STBD1O95210 358 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 RPL13P26373 211 aaKnown RBP29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 TERF1P54274 439 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 RAD9BQ6WBX8 426 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 MAEAQ7L5Y9 396 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 TMTC1Q8IUR5 882 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 REXO1L1PQ8IX06 675 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 OR8K1Q8NGG5 319 aa29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 GTF3C2Q8WUA4 911 aaPredicted RBP29.29■■■□□ 2.28
SH3GL3-202ENST00000427482 A0A1W2PQJ5 194 aa29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 ERVK-9P63128 1117 aa29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 ERVK-24P63145 666 aa29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 MTF1Q14872 753 aa29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 SWSAP1Q6NVH7 229 aa29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 MIS18BP1Q6P0N0 1132 aa29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 FRMD5Q7Z6J6 570 aa29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 CCDC60Q8IWA6 550 aaPredicted RBP29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 SH2D3AQ9BRG2 576 aa29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 MROH8Q9H579 483 aa29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 RRAGCQ9HB90 399 aa29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 GBA2Q9HCG7 927 aaPredicted RBP29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 FAM184BQ9ULE4 1060 aa29.28■■■□□ 2.28
SH3GL3-202ENST00000427482 SUPT20HL2P0C7V6 817 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 CETPP11597 493 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 PLS3P13797 630 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 NPEPPSP55786 919 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 SP4Q02446 784 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 OTUD6AQ7L8S5 288 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 MS4A4AQ96JQ5 239 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 FGD4Q96M96 766 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 DRC1Q96MC2 740 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 MMP19Q99542 508 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 DNAJC25-GNG10A0A024R161 153 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 KIF2AO00139 706 aaPredicted RBP29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 SLC16A3O15427 465 aaKnown RBP29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 CYP26C1Q6V0L0 522 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 CYFIP1Q7L576 1253 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 SHCBP1Q8NEM2 672 aa29.27■■■□□ 2.28
SH3GL3-202ENST00000427482 PRIMPOLQ96LW4 560 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms