RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 RAD54L2Q9Y4B4 1467 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 CECR2Q9BXF3 1484 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 MEFVO15553 781 aaPredicted RBP8.31□□□□□ -1.08
LINC00649-203ENST00000427447 SURF6O75683 361 aaKnown RBP8.31□□□□□ -1.08
LINC00649-203ENST00000427447 UBTFL1P0CB47 393 aaPredicted RBP8.31□□□□□ -1.08
LINC00649-203ENST00000427447 PRIM1P49642 420 aaKnown RBP8.31□□□□□ -1.08
LINC00649-203ENST00000427447 CLK1P49759 484 aaKnown RBP8.31□□□□□ -1.08
LINC00649-203ENST00000427447 EXOSC10Q01780 885 aaKnown RBP8.31□□□□□ -1.08
LINC00649-203ENST00000427447 TNNI3KQ59H18 835 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 LRIF1Q5T3J3 769 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 MIEF2Q96C03 454 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 PANX2Q96RD6 677 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 ARHGEF37A1IGU5 675 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 PPARGP37231 505 aaPredicted RBP8.31□□□□□ -1.08
LINC00649-203ENST00000427447 SETD4Q9NVD3 440 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 SPATA7Q9P0W8 599 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 CCDC154A6NI56 674 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 SRRM3A6NNA2 597 aaPredicted RBP8.31□□□□□ -1.08
LINC00649-203ENST00000427447 METTL6Q8TCB7 284 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 ROGDIQ9GZN7 287 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 RANBP17Q9H2T7 1088 aaKnown RBP8.31□□□□□ -1.08
LINC00649-203ENST00000427447 RPRD1BQ9NQG5 326 aaKnown RBP8.31□□□□□ -1.08
LINC00649-203ENST00000427447 DLGAP2Q9P1A6 1054 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 C6orf222P0C671 652 aaPredicted RBP8.31□□□□□ -1.08
LINC00649-203ENST00000427447 CORO7P57737 925 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 FCHSD1Q86WN1 690 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 GRK7Q8WTQ7 553 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 CEP95Q96GE4 821 aa8.31□□□□□ -1.08
LINC00649-203ENST00000427447 CUEDC1Q9NWM3 386 aaPredicted RBP8.31□□□□□ -1.08
LINC00649-203ENST00000427447 CFAP99D6REC4 459 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 STX6O43752 255 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 NOL4O94818 638 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 PARNO95453 639 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 ARF4P18085 180 aaPredicted RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 CD53P19397 219 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 SSFA2P28290 1259 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 RGS2P41220 211 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 TBC1D15Q8TC07 691 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 GORASP1Q9BQQ3 440 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 ACAT2Q9BWD1 397 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 EPB41L5Q9HCM4 733 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 ANKRD30BQ9BXX2 1392 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 THOC2Q8NI27 1593 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 KRT87PA6NCN2 255 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 TUFMP49411 452 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 LONRF2Q1L5Z9 754 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 HMBOX1Q6NT76 420 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 RASSF6Q6ZTQ3 369 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 LRRC20Q8TCA0 184 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 NOL6Q9H6R4 1146 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 RNF14Q9UBS8 474 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 MAGED2Q9UNF1 606 aaPredicted RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 SEMA3EO15041 775 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 NR1D1P20393 614 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 CDH3P22223 829 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 MKRN3Q13064 507 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 KNOP1Q1ED39 458 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 USP48Q86UV5 1035 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 NLRP2Q9NX02 1062 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 TTKP33981 857 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 PDAP1Q13442 181 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 RETREG2Q8NC44 543 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 SAMSN1Q9NSI8 373 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 ASAP1Q9ULH1 1129 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 SPDYE5A6NIY4 337 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 TCP11X1B4DZS4 312 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 KCNK1O00180 336 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 SCP2P22307 547 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 KRT79Q5XKE5 535 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 TTC25Q96NG3 672 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 TIMMDC1Q9NPL8 285 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 TRIM33Q9UPN9 1127 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 CROCCQ5TZA2 2017 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 A6NJR5 290 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 SPDYE16A6NNV3 312 aaPredicted RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 IFIT5Q13325 482 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 HIF1AQ16665 826 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 HAUS3Q68CZ6 603 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 FAM45AQ8TCE6 357 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 GABBR1Q9UBS5 961 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 GNAI3P08754 354 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 MFAP3P55082 362 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 MARSP56192 900 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 RALGDSQ12967 914 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 PLCZ1Q86YW0 608 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 AGGF1Q8N302 714 aaeCLIP8.3□□□□□ -1.081e-6■■■□□ 15.7
LINC00649-203ENST00000427447 FBXL13Q8NEE6 735 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 SNIP1Q8TAD8 396 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 PPP1R13LQ8WUF5 828 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 SYMPKQ92797 1274 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 EZH1Q92800 747 aaPredicted RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 TCEANC2Q96MN5 208 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 THTPAQ9BU02 230 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 RIOK2Q9BVS4 552 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 LSG1Q9H089 658 aaKnown RBP8.3□□□□□ -1.08
LINC00649-203ENST00000427447 VPS4AQ9UN37 437 aa8.3□□□□□ -1.08
LINC00649-203ENST00000427447 LINC00854A0A1B0GVQ3 168 aa8.29□□□□□ -1.08
LINC00649-203ENST00000427447 MED26O95402 600 aa8.29□□□□□ -1.08
LINC00649-203ENST00000427447 ZNF3P17036 446 aa8.29□□□□□ -1.08
LINC00649-203ENST00000427447 MAGEA6P43360 314 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms