RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ZKSCAN4Q969J2 545 aaPredicted RBP15.68■□□□□ 0.1
MSH5-206ENST00000423982 NFS1Q9Y697 457 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 FRMPD2Q68DX3 1309 aaPredicted RBP15.68■□□□□ 0.1
MSH5-206ENST00000423982 PVALEFA0A1B0GWK0 134 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 HMGB1P1B2RPK0 211 aaPredicted RBP15.67■□□□□ 0.1
MSH5-206ENST00000423982 DNM1LO00429 736 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 HLA-DOAP06340 250 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 USP8P40818 1118 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 EPS15P42566 896 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 COASYQ13057 564 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 C6orf89Q6UWU4 347 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 C16orf86Q6ZW13 317 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 MYOCDQ8IZQ8 938 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 ANKS1AQ92625 1134 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 OSBPL7Q9BZF2 842 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 DDX20Q9UHI6 824 aaKnown RBP15.67■□□□□ 0.1
MSH5-206ENST00000423982 RAD21O60216 631 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 CTNNA1P35221 906 aaKnown RBP15.67■□□□□ 0.1
MSH5-206ENST00000423982 ZCWPW2Q504Y3 356 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 UBLCP1Q8WVY7 318 aaPredicted RBP15.67■□□□□ 0.1
MSH5-206ENST00000423982 DNAJC18Q9H819 358 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 SLC40A1Q9NP59 571 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 KLC4Q9NSK0 619 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 RNF14Q9UBS8 474 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 ATXN2Q99700 1313 aaKnown RBP15.67■□□□□ 0.1
MSH5-206ENST00000423982 GDF11O95390 407 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 MYBP10242 640 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 PDHBP11177 359 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 AKR1B1P15121 316 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 PTK2Q05397 1052 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 EMC10Q5UCC4 262 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 MICALCLQ6ZW33 695 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 DNAJC19Q96DA6 116 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 TSG101Q99816 390 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 TMEM59LQ9UK28 342 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 FBXL5Q9UKA1 691 aa15.67■□□□□ 0.1
MSH5-206ENST00000423982 A6NNZ2 444 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 USP17L5A8MUK1 530 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 GCOM1H8Y6P7 765 aaPredicted RBP15.66■□□□□ 0.1
MSH5-206ENST00000423982 FGFR1OPO95684 399 aaKnown RBP15.66■□□□□ 0.1
MSH5-206ENST00000423982 MYZAPP0CAP1 466 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 TNNC1P63316 161 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 RPS6KA1Q15418 735 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 TUBB8Q3ZCM7 444 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 TRPM4Q8TD43 1214 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 PAGR1Q9BTK6 254 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 MRIQ9BWK5 157 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 CELF4Q9BZC1 486 aaKnown RBP15.66■□□□□ 0.1
MSH5-206ENST00000423982 ISCUQ9H1K1 167 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 AMACRQ9UHK6 382 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 SLC12A6Q9UHW9 1150 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 GOLGA6L10A6NI86 522 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 DAPK3O43293 454 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 GNA11P29992 359 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 FKBP3Q00688 224 aaKnown RBP15.66■□□□□ 0.1
MSH5-206ENST00000423982 UBE2SQ16763 222 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 ODF2Q5BJF6 829 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 IDI2Q9BXS1 227 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 PLCB1Q9NQ66 1216 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 STK17AQ9UEE5 414 aa15.66■□□□□ 0.1
MSH5-206ENST00000423982 NOVA2Q9UNW9 492 aaKnown RBP15.66■□□□□ 0.1
MSH5-206ENST00000423982 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.66■□□□□ 0.1
MSH5-206ENST00000423982 DDX60LQ5H9U9 1706 aaKnown RBP15.65■□□□□ 0.1
MSH5-206ENST00000423982 SART1O43290 800 aaKnown RBP15.65■□□□□ 0.1
MSH5-206ENST00000423982 RASSF9O75901 435 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 SLC9A1P19634 815 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 SPDYE2Q495Y8 402 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 DLK2Q6UY11 383 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 ZNF571Q7Z3V5 609 aaPredicted RBP15.65■□□□□ 0.1
MSH5-206ENST00000423982 YTHDF3Q7Z739 585 aaKnown RBP15.65■□□□□ 0.1
MSH5-206ENST00000423982 TAF4BQ92750 862 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 CCDC114Q96M63 670 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 SPZ1Q9BXG8 430 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 TRIM31Q9BZY9 425 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 HAUS2Q9NVX0 235 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.65■□□□□ 0.1
MSH5-206ENST00000423982 SEC63Q9UGP8 760 aaKnown RBP15.65■□□□□ 0.1
MSH5-206ENST00000423982 FZD1Q9UP38 647 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 ABCB11O95342 1321 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 PSME4Q14997 1843 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 GMNCA6NCL1 334 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 PHF20L1A8MW92 1017 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 E9PMD0 336 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 KIF4AO95239 1232 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 SHMT1P34896 483 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 TNNI2P48788 182 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 SETQ01105 290 aaPredicted RBP15.65■□□□□ 0.1
MSH5-206ENST00000423982 BYSLQ13895 437 aaKnown RBP15.65■□□□□ 0.1
MSH5-206ENST00000423982 ASIC2Q16515 512 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 MDM1Q8TC05 714 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 CEP95Q96GE4 821 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 PANK4Q9NVE7 773 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 ROBO3Q96MS0 1386 aa15.65■□□□□ 0.1
MSH5-206ENST00000423982 TMCO5BA8MYB1 307 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 OPLAHO14841 1288 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 FAM26FQ5R3K3 315 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 SPATS2Q86XZ4 545 aaKnown RBP15.64■□□□□ 0.09
MSH5-206ENST00000423982 METTL13Q8N6R0 699 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 DPH5Q9H2P9 285 aa15.64■□□□□ 0.09
MSH5-206ENST00000423982 ZHX3Q9H4I2 956 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms