RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 VAV3Q9UKW4 847 aa20.13■□□□□ 0.81
SBDSP1-202ENST00000423945 TRPV2Q9Y5S1 764 aa20.13■□□□□ 0.81
SBDSP1-202ENST00000423945 KDM3AQ9Y4C1 1321 aa20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 KIF28PB7ZC32 967 aa20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 EML1O00423 815 aa20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 CCNT1O60563 726 aaKnown RBP20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 GCFC2P16383 781 aaKnown RBP20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 TSHZ1Q6ZSZ6 1077 aa20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 MIER3Q7Z3K6 550 aa20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 DIS3L2Q8IYB7 885 aaKnown RBP20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 MYOCDQ8IZQ8 938 aa20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 LINC01465Q8N7H1 131 aa20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 LINC01599Q8WXQ3 324 aa20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 APBB2Q92870 758 aa20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 RAD9AQ99638 391 aa20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 CELF4Q9BZC1 486 aaKnown RBP20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 CDHR5Q9HBB8 845 aa20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 COL4A4P53420 1690 aaPredicted RBP20.12■□□□□ 0.81
SBDSP1-202ENST00000423945 RFXAPO00287 272 aa20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 AMHP03971 560 aa20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 OATP04181 439 aa20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 RPLP2P05387 115 aaKnown RBP20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 CD52P31358 61 aa20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 HTRA4P83105 476 aaPredicted RBP20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 PRKCEQ02156 737 aa20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 IER5Q5VY09 327 aa20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 POTEDQ86YR6 584 aa20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 USP38Q8NB14 1042 aa20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 RDM1Q8NG50 284 aa20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 TOP1MTQ969P6 601 aa20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 ZSCAN31Q96LW9 406 aaPredicted RBP20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 LLPHQ9BRT6 129 aaKnown RBP20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 ZBED2Q9BTP6 218 aa20.11■□□□□ 0.81
SBDSP1-202ENST00000423945 TTC3P53804 2025 aa20.1■□□□□ 0.81
SBDSP1-202ENST00000423945 COL4A6Q14031 1691 aa20.1■□□□□ 0.81
SBDSP1-202ENST00000423945 GUCY1B3Q02153 619 aa20.1■□□□□ 0.81
SBDSP1-202ENST00000423945 PPP2R5CQ13362 524 aa20.1■□□□□ 0.81
SBDSP1-202ENST00000423945 TARBP2Q15633 366 aaKnown RBP20.1■□□□□ 0.81
SBDSP1-202ENST00000423945 RTN4RL1Q86UN2 441 aaPredicted RBP20.1■□□□□ 0.81
SBDSP1-202ENST00000423945 NME8Q8N427 588 aa20.1■□□□□ 0.81
SBDSP1-202ENST00000423945 FAM167AQ96KS9 214 aa20.1■□□□□ 0.81
SBDSP1-202ENST00000423945 FAM20AQ96MK3 541 aa20.1■□□□□ 0.81
SBDSP1-202ENST00000423945 CEP89Q96ST8 783 aa20.1■□□□□ 0.81
SBDSP1-202ENST00000423945 GAS2L1Q99501 681 aaPredicted RBP20.1■□□□□ 0.81
SBDSP1-202ENST00000423945 SQORQ9Y6N5 450 aa20.1■□□□□ 0.81
SBDSP1-202ENST00000423945 LINC01553A4QN01 128 aa20.09■□□□□ 0.81
SBDSP1-202ENST00000423945 TMEM150BA6NC51 233 aa20.09■□□□□ 0.81
SBDSP1-202ENST00000423945 CD2BP2O95400 341 aaKnown RBP20.09■□□□□ 0.81
SBDSP1-202ENST00000423945 SPIRE1Q08AE8 756 aa20.09■□□□□ 0.81
SBDSP1-202ENST00000423945 RABEP1Q15276 862 aa20.09■□□□□ 0.81
SBDSP1-202ENST00000423945 SP7Q8TDD2 431 aaPredicted RBP20.09■□□□□ 0.81
SBDSP1-202ENST00000423945 TMEM40Q8WWA1 233 aa20.09■□□□□ 0.81
SBDSP1-202ENST00000423945 BRMS1Q9HCU9 246 aa20.09■□□□□ 0.81
SBDSP1-202ENST00000423945 SH2B1Q9NRF2 756 aaPredicted RBP20.09■□□□□ 0.81
SBDSP1-202ENST00000423945 ENPP3O14638 875 aa20.08■□□□□ 0.81
SBDSP1-202ENST00000423945 TBX3O15119 743 aa20.08■□□□□ 0.81
SBDSP1-202ENST00000423945 CLCN3P51790 818 aa20.08■□□□□ 0.81
SBDSP1-202ENST00000423945 BANK1Q8NDB2 785 aa20.08■□□□□ 0.81
SBDSP1-202ENST00000423945 PPP1R16BQ96T49 567 aa20.08■□□□□ 0.81
SBDSP1-202ENST00000423945 NRBP2Q9NSY0 501 aa20.08■□□□□ 0.81
SBDSP1-202ENST00000423945 PADI3Q9ULW8 664 aa20.08■□□□□ 0.81
SBDSP1-202ENST00000423945 CEP131Q9UPN4 1083 aa20.08■□□□□ 0.81
SBDSP1-202ENST00000423945 PRRC2BQ5JSZ5 2229 aaKnown RBP20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 M0QZ92 97 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 LPXNO60711 386 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 GPR32O75388 356 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 UPP2O95045 317 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 VTNP04004 478 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 TRIM29Q14134 588 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 TMEM266Q2M3C6 531 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 LRRC71Q8N4P6 559 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 ARNTL2Q8WYA1 636 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 NAP1L4Q99733 375 aaKnown RBP20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 SH2D3AQ9BRG2 576 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 NIFKQ9BYG3 293 aaKnown RBP20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 TMX1Q9H3N1 280 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 WRAP73Q9P2S5 460 aaPredicted RBP20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 NOC2LQ9Y3T9 749 aaKnown RBP20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 INSL6Q9Y581 213 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 NLRC5Q86WI3 1866 aa20.07■□□□□ 0.8
SBDSP1-202ENST00000423945 MAGEB2O15479 319 aa20.06■□□□□ 0.8
SBDSP1-202ENST00000423945 ERVK-21P61565 698 aa20.06■□□□□ 0.8
SBDSP1-202ENST00000423945 KIZQ2M2Z5 673 aa20.06■□□□□ 0.8
SBDSP1-202ENST00000423945 XKR3Q5GH77 459 aa20.06■□□□□ 0.8
SBDSP1-202ENST00000423945 EFCAB12Q6NXP0 572 aa20.06■□□□□ 0.8
SBDSP1-202ENST00000423945 CRIPAKQ8N1N5 446 aa20.06■□□□□ 0.8
SBDSP1-202ENST00000423945 METTL13Q8N6R0 699 aa20.06■□□□□ 0.8
SBDSP1-202ENST00000423945 C8orf76Q96K31 380 aa20.06■□□□□ 0.8
SBDSP1-202ENST00000423945 TBC1D32Q96NH3 1257 aa20.06■□□□□ 0.8
SBDSP1-202ENST00000423945 RC3H2Q9HBD1 1191 aaKnown RBP20.06■□□□□ 0.8
SBDSP1-202ENST00000423945 ERVK-5Q9HDB9 667 aa20.06■□□□□ 0.8
SBDSP1-202ENST00000423945 IGFBP4P22692 258 aa20.05■□□□□ 0.8
SBDSP1-202ENST00000423945 PSMC5P62195 406 aa20.05■□□□□ 0.8
SBDSP1-202ENST00000423945 HMGN5P82970 282 aaKnown RBP20.05■□□□□ 0.8
SBDSP1-202ENST00000423945 DRP2Q13474 957 aa20.05■□□□□ 0.8
SBDSP1-202ENST00000423945 MTERF2Q49AM1 385 aa20.05■□□□□ 0.8
SBDSP1-202ENST00000423945 ANO5Q75V66 913 aa20.05■□□□□ 0.8
SBDSP1-202ENST00000423945 FBXO18Q8NFZ0 1043 aa20.05■□□□□ 0.8
SBDSP1-202ENST00000423945 OSMRQ99650 979 aa20.05■□□□□ 0.8
SBDSP1-202ENST00000423945 ADAMTS10Q9H324 1103 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms