RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 AMNQ9BXJ7 453 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 PLAAQ9Y263 795 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 SHTN1A0MZ66 631 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 PDXKO00764 312 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 OPLAHO14841 1288 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 CHMP2AO43633 222 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 CALUO43852 315 aaPredicted RBP17.26■□□□□ 0.35
CDH1-202ENST00000422392 NMT1P30419 496 aaKnown RBP17.26■□□□□ 0.35
CDH1-202ENST00000422392 AP3B2Q13367 1082 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 COG2Q14746 738 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 HHIPL2Q6UWX4 724 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 FBXO11Q86XK2 927 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 TPCN2Q8NHX9 752 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 DCAF4Q8WV16 495 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 GLT8D2Q9H1C3 349 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 NEUROG2Q9H2A3 272 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 FAM198AQ9UFP1 575 aa17.26■□□□□ 0.35
CDH1-202ENST00000422392 LIG3P49916 1009 aa17.25■□□□□ 0.35
CDH1-202ENST00000422392 JAG1P78504 1218 aa17.25■□□□□ 0.35
CDH1-202ENST00000422392 CEP85LQ5SZL2 805 aa17.25■□□□□ 0.35
CDH1-202ENST00000422392 U2AF1L4Q8WU68 220 aaKnown RBP17.25■□□□□ 0.35
CDH1-202ENST00000422392 EIF2AK1Q9BQI3 630 aaKnown RBP17.25■□□□□ 0.35
CDH1-202ENST00000422392 TYW1Q9NV66 732 aaKnown RBP17.25■□□□□ 0.35
CDH1-202ENST00000422392 VAV3Q9UKW4 847 aa17.25■□□□□ 0.35
CDH1-202ENST00000422392 NOC2LQ9Y3T9 749 aaKnown RBP17.25■□□□□ 0.35
CDH1-202ENST00000422392 C10orf71Q711Q0 1435 aa17.25■□□□□ 0.35
CDH1-202ENST00000422392 DDX3XO00571 662 aaKnown RBP eCLIP17.25■□□□□ 0.35
CDH1-202ENST00000422392 NDUFAB1O14561 156 aa17.25■□□□□ 0.35
CDH1-202ENST00000422392 TOM1O60784 492 aa17.25■□□□□ 0.35
CDH1-202ENST00000422392 TBCAO75347 108 aaKnown RBP17.25■□□□□ 0.35
CDH1-202ENST00000422392 Q4G0T1 1027 aa17.25■□□□□ 0.35
CDH1-202ENST00000422392 MICALL1Q8N3F8 863 aa17.25■□□□□ 0.35
CDH1-202ENST00000422392 MKL1Q969V6 931 aa17.25■□□□□ 0.35
CDH1-202ENST00000422392 TAF1DQ9H5J8 278 aaPredicted RBP17.25■□□□□ 0.35
CDH1-202ENST00000422392 RABGAP1Q9Y3P9 1069 aa17.25■□□□□ 0.35
CDH1-202ENST00000422392 MYH11P35749 1972 aa17.25■□□□□ 0.35
CDH1-202ENST00000422392 SART1O43290 800 aaKnown RBP17.24■□□□□ 0.35
CDH1-202ENST00000422392 TGFB1I1O43294 461 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 FLOT1O75955 427 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 NDUFB10O96000 172 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 ZBTB48P10074 688 aaPredicted RBP17.24■□□□□ 0.35
CDH1-202ENST00000422392 NR1D1P20393 614 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 HPDP32754 393 aaPredicted RBP17.24■□□□□ 0.35
CDH1-202ENST00000422392 ZNF76P36508 570 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 FLT3P36888 993 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 JAM2P57087 298 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 UBXN2AP68543 259 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 TTC31Q49AM3 519 aaPredicted RBP17.24■□□□□ 0.35
CDH1-202ENST00000422392 PEX26Q7Z412 305 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 DAAM2Q86T65 1068 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 MREGQ8N565 214 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 SCFD2Q8WU76 684 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 OSGEPQ9NPF4 335 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 NYAP2Q9P242 653 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 AMACRQ9UHK6 382 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 BCS1LQ9Y276 419 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 KLRG2A4D1S0 409 aaPredicted RBP17.24■□□□□ 0.35
CDH1-202ENST00000422392 SREBF1P36956 1147 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 MOXD1Q6UVY6 613 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 TADA2BQ86TJ2 420 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 WHAMMQ8TF30 809 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 SCN9AQ15858 1988 aa17.24■□□□□ 0.35
CDH1-202ENST00000422392 BTNL10A8MVZ5 291 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 PRKCIP41743 596 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 RINT1Q6NUQ1 792 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 TPH2Q8IWU9 490 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 EFCAB13Q8IY85 973 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 PPM1EQ8WY54 764 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 CELF4Q9BZC1 486 aaKnown RBP17.23■□□□□ 0.35
CDH1-202ENST00000422392 ISCUQ9H1K1 167 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 PI4KBQ9UBF8 816 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 BZW2Q9Y6E2 419 aaKnown RBP17.23■□□□□ 0.35
CDH1-202ENST00000422392 NRXN2Q9P2S2 1712 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 ZMYM2Q9UBW7 1377 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 H2AFZP0C0S5 128 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 HSD17B3P37058 310 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 SEC24CP53992 1094 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 UAP1Q16222 522 aaPredicted RBP17.23■□□□□ 0.35
CDH1-202ENST00000422392 C10orf76Q5T2E6 689 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 NAA35Q5VZE5 725 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 H2AFVQ71UI9 128 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 GLYCTKQ8IVS8 523 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 MYCT1Q8N699 235 aa17.23■□□□□ 0.35
CDH1-202ENST00000422392 LNX1Q8TBB1 728 aaPredicted RBP17.23■□□□□ 0.35
CDH1-202ENST00000422392 GJD4Q96KN9 370 aaPredicted RBP17.23■□□□□ 0.35
CDH1-202ENST00000422392 PGRMC1O00264 195 aaKnown RBP17.22■□□□□ 0.35
CDH1-202ENST00000422392 KRIT1O00522 736 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 TBX3O15119 743 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 EVI5O60447 810 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 ABCB4P21439 1286 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 LSP1P33241 339 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 SYDE2Q5VT97 1194 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 KDM7AQ6ZMT4 941 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 ADAT2Q7Z6V5 191 aaKnown RBP17.22■□□□□ 0.35
CDH1-202ENST00000422392 ACTRT1Q8TDG2 376 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 ATP6V1G3Q96LB4 118 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 RPL13P26373 211 aaKnown RBP17.22■□□□□ 0.35
CDH1-202ENST00000422392 HSPA9P38646 679 aaKnown RBP17.22■□□□□ 0.35
CDH1-202ENST00000422392 GALCP54803 685 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 PBKQ96KB5 322 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms