RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 MYO1FO00160 1098 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 CXCL9Q07325 125 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 NUDT18Q6ZVK8 323 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 PDS5AQ29RF7 1337 aaKnown RBP11.63□□□□□ -0.55
PTCH1-206ENST00000421141 DISP2A7MBM2 1401 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 HEXIM1O94992 359 aaKnown RBP11.63□□□□□ -0.55
PTCH1-206ENST00000421141 IL1R1P14778 569 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 RRN3P2A6NIE6 340 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 DCDC2CA8MYV0 355 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 CEP104O60308 925 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 ZNF827Q17R98 1081 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 STAG2Q8N3U4 1231 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 LINC00301Q8NCQ3 95 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 ERO1AQ96HE7 468 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 SUCLA2Q9P2R7 463 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-206ENST00000421141 PIN4Q9Y237 131 aaKnown RBP11.63□□□□□ -0.55
PTCH1-206ENST00000421141 BSPRYQ5W0U4 402 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 SCARA5Q6ZMJ2 495 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 TTC39CQ8N584 583 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 LMBRD1Q9NUN5 540 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 SMIM23A6NLE4 172 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 CD58P19256 250 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 ZBTB16Q05516 673 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 AIFM3Q96NN9 605 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 TMEM260Q9NX78 707 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 SFI1A8K8P3 1242 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 SKIP12755 728 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 CDC25AP30304 524 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 FKBP1AP62942 108 aaKnown RBP11.62□□□□□ -0.55
PTCH1-206ENST00000421141 TTBK2Q6IQ55 1244 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 THNSL1Q8IYQ7 743 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 AAASQ9NRG9 546 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 SCN11AQ9UI33 1791 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 COPB1P53618 953 aaKnown RBP11.62□□□□□ -0.55
PTCH1-206ENST00000421141 INHBEP58166 350 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 HS1BP3Q53T59 392 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 UNC13DQ70J99 1090 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
PTCH1-206ENST00000421141 GANCQ8TET4 914 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 CCDC68Q9H2F9 335 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 SHPRHQ149N8 1683 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 POTEB3A0JP26 581 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 TBC1D8O95759 1140 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 RPLP2P05387 115 aaKnown RBP11.62□□□□□ -0.55
PTCH1-206ENST00000421141 POTEBQ6S5H4 581 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 EFCAB13Q8IY85 973 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 PCSK9Q8NBP7 692 aaKnown RBP11.62□□□□□ -0.55
PTCH1-206ENST00000421141 DPF3Q92784 378 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 NCAPGQ9BPX3 1015 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 PAK2Q13177 524 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 SCN4BQ8IWT1 228 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 EEF2KMTQ96G04 330 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 MAP3K14Q99558 947 aa11.62□□□□□ -0.55
PTCH1-206ENST00000421141 TADA2AO75478 443 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 TOB2Q14106 344 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-206ENST00000421141 YAF2Q8IY57 180 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 ACAP3Q96P50 834 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 SELENOSQ9BQE4 189 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 XPO4Q9C0E2 1151 aaKnown RBP11.61□□□□□ -0.55
PTCH1-206ENST00000421141 ICAM1P05362 532 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 SMARCA1P28370 1054 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 KAZNQ674X7 775 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 DNAJC24Q6P3W2 148 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 SYT10Q6XYQ8 523 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 PROM2Q8N271 834 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 KCNK9Q9NPC2 374 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 POTEFA5A3E0 1075 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 F8W8V4 182 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 POTEIP0CG38 1075 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 MXRA7P84157 204 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 C10orf76Q5T2E6 689 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 POTEGQ6S5H5 508 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 POTEEQ6S8J3 1075 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 TRIM62Q9BVG3 475 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 FANCLQ9NW38 375 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 LONRF2Q1L5Z9 754 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 MAP1SQ66K74 1059 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-206ENST00000421141 XXYLT1Q8NBI6 393 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 AFG1LQ8WV93 481 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 SOCS4Q8WXH5 440 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 SLIT3O75094 1523 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 GMNNO75496 209 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 ARL4AP40617 200 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 GPIHBP1Q8IV16 184 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 RAD54LQ92698 747 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 DPF2Q92785 391 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 CXCL11O14625 94 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 TBXAS1P24557 533 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-206ENST00000421141 PHBP35232 272 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 ADKP55263 362 aaKnown RBP11.61□□□□□ -0.55
PTCH1-206ENST00000421141 RESP18Q5W5W9 173 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 TTC30AQ86WT1 665 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 NDUFAF2Q8N183 169 aa11.61□□□□□ -0.55
PTCH1-206ENST00000421141 SLC26A4O43511 780 aa11.6□□□□□ -0.55
PTCH1-206ENST00000421141 KLRK1P26718 216 aa11.6□□□□□ -0.55
PTCH1-206ENST00000421141 TCHHQ07283 1943 aa11.6□□□□□ -0.55
PTCH1-206ENST00000421141 POTECB2RU33 542 aa11.6□□□□□ -0.55
PTCH1-206ENST00000421141 IFNB1P01574 187 aa11.6□□□□□ -0.55
PTCH1-206ENST00000421141 RHOXF2BP0C7M4 288 aa11.6□□□□□ -0.55
PTCH1-206ENST00000421141 ZNF445P59923 1031 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms