RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 PLA2G4FQ68DD2 849 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 RINT1Q6NUQ1 792 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 GRAMD1CQ8IYS0 662 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 ARRDC4Q8NCT1 418 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 CEP170P1Q96L14 293 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 CEP89Q96ST8 783 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 SH2D3AQ9BRG2 576 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 TSEN34Q9BSV6 310 aaKnown RBP13.92□□□□□ -0.18
TMEM53-206ENST00000420706 MTG1Q9BT17 334 aaPredicted RBP13.92□□□□□ -0.18
TMEM53-206ENST00000420706 TNMDQ9H2S6 317 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 CLSTN2Q9H4D0 955 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 TMEM63CQ9P1W3 806 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 SEPT9Q9UHD8 586 aaPredicted RBP13.92□□□□□ -0.18
TMEM53-206ENST00000420706 OGDHLQ9ULD0 1010 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 FRMPD3Q5JV73 1810 aa13.92□□□□□ -0.18
TMEM53-206ENST00000420706 ARHGEF35A5YM69 484 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 MYMKA6NI61 221 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 CCDC85CA6NKD9 419 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 SGPL1O95470 568 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 MYCNP04198 464 aaPredicted RBP13.91□□□□□ -0.18
TMEM53-206ENST00000420706 CYP11B2P19099 503 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 AMPD3Q01432 767 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 MFSD10Q14728 455 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 KIAA0753Q2KHM9 967 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 MTERF2Q49AM1 385 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 ARSHQ5FYA8 562 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 ZNF484Q5JVG2 852 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 CAVIN1Q6NZI2 390 aaKnown RBP13.91□□□□□ -0.18
TMEM53-206ENST00000420706 CXCL17Q6UXB2 119 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 C1orf186Q6ZWK4 172 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 CCDC34Q96HJ3 373 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 ABHD8Q96I13 439 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 C7orf25Q9BPX7 421 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 KATNAL1Q9BW62 490 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 LRRC27Q9C0I9 530 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 NUP62CLQ9H1M0 184 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 CYP26B1Q9NR63 512 aa13.91□□□□□ -0.18
TMEM53-206ENST00000420706 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.9□□□□□ -0.18
TMEM53-206ENST00000420706 MOXD2PA6NHM9 499 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 ZBTB42B2RXF5 422 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 GTPBP6O43824 516 aaPredicted RBP13.9□□□□□ -0.18
TMEM53-206ENST00000420706 GJB1P08034 283 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 PRR29P0C7W0 189 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 INSRRP14616 1297 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 CASP1P29466 404 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 CUL4BQ13620 913 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 POSTNQ15063 836 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 PADI6Q6TGC4 694 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 GPBP1Q86WP2 473 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 RUSC1Q9BVN2 902 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 TRIM9Q9C026 710 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 CRISPLD2Q9H0B8 497 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 BLZF1Q9H2G9 400 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 PDLIM7Q9NR12 457 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 TRPC6Q9Y210 931 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 PPME1Q9Y570 386 aa13.9□□□□□ -0.18
TMEM53-206ENST00000420706 DGAT1O75907 488 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 CABYRO75952 493 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 MYL1P05976 194 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 ACLYP53396 1101 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 DPYDQ12882 1025 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 PNOCQ13519 176 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 GIT2Q14161 759 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 CCDC183Q5T5S1 534 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 CNNM4Q6P4Q7 775 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 U2AF1L4Q8WU68 220 aaKnown RBP13.89□□□□□ -0.19
TMEM53-206ENST00000420706 DDX12PQ92771 950 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 ERCC4Q92889 916 aaPredicted RBP13.89□□□□□ -0.19
TMEM53-206ENST00000420706 SYAP1Q96A49 352 aaPredicted RBP13.89□□□□□ -0.19
TMEM53-206ENST00000420706 DNAJC19Q96DA6 116 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 CCDC43Q96MW1 224 aaKnown RBP13.89□□□□□ -0.19
TMEM53-206ENST00000420706 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
TMEM53-206ENST00000420706 KCND2Q9NZV8 630 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 HOOK1Q9UJC3 728 aaKnown RBP13.89□□□□□ -0.19
TMEM53-206ENST00000420706 PHF24Q9UPV7 400 aa13.89□□□□□ -0.19
TMEM53-206ENST00000420706 COL1A2P08123 1366 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 NPHP3-ACAD11A0A0J9YXS1 232 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 RRN3P2A6NIE6 340 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 DNM1LO00429 736 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 USO1O60763 962 aaKnown RBP13.88□□□□□ -0.19
TMEM53-206ENST00000420706 MAFO75444 373 aaPredicted RBP13.88□□□□□ -0.19
TMEM53-206ENST00000420706 TFRCP02786 760 aaKnown RBP13.88□□□□□ -0.19
TMEM53-206ENST00000420706 SMIM10L2AP0DMW4 78 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 SMIM10L2BP0DMW5 78 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 SARSP49591 514 aaKnown RBP13.88□□□□□ -0.19
TMEM53-206ENST00000420706 CHMP4BP1P59074 171 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 PPFIA1Q13136 1202 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 NBPF20Q3BBV1 942 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 DYMQ7RTS9 669 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 PPP1R13LQ8WUF5 828 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 TRAPPC12Q8WVT3 735 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 DHX33Q9H6R0 707 aaKnown RBP13.88□□□□□ -0.19
TMEM53-206ENST00000420706 POLD4Q9HCU8 107 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 XPNPEP1Q9NQW7 623 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 SETD4Q9NVD3 440 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 HDAC6Q9UBN7 1215 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 PCDHA5Q9Y5H7 936 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 SCN10AQ9Y5Y9 1956 aa13.88□□□□□ -0.19
TMEM53-206ENST00000420706 GRIN2DO15399 1336 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms