RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 BRMS1Q9HCU9 246 aa18.58■□□□□ 0.56
LINC00404-201ENST00000418660 ENPP3O14638 875 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 MAGEB2O15479 319 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 SLC37A4O43826 429 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 JAK2O60674 1132 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 UPP2O95045 317 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 OATP04181 439 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 CD52P31358 61 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 ERVK-21P61565 698 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 ST3GAL1Q11201 340 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 SPRED2Q7Z698 418 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 PPM1EQ8WY54 764 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 FAM20AQ96MK3 541 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 TGS1Q96RS0 853 aaKnown RBP18.57■□□□□ 0.56
LINC00404-201ENST00000418660 KCNMB3Q9NPA1 279 aa18.57■□□□□ 0.56
LINC00404-201ENST00000418660 GTPBP6O43824 516 aaPredicted RBP18.56■□□□□ 0.56
LINC00404-201ENST00000418660 CCNT1O60563 726 aaKnown RBP18.56■□□□□ 0.56
LINC00404-201ENST00000418660 PRKCEQ02156 737 aa18.56■□□□□ 0.56
LINC00404-201ENST00000418660 CCDC85BQ15834 202 aaPredicted RBP18.56■□□□□ 0.56
LINC00404-201ENST00000418660 UGCGQ16739 394 aa18.56■□□□□ 0.56
LINC00404-201ENST00000418660 EARS2Q5JPH6 523 aaKnown RBP18.56■□□□□ 0.56
LINC00404-201ENST00000418660 TNFRSF25Q93038 417 aa18.56■□□□□ 0.56
LINC00404-201ENST00000418660 YME1L1Q96TA2 773 aa18.56■□□□□ 0.56
LINC00404-201ENST00000418660 KIF2CQ99661 725 aa18.56■□□□□ 0.56
LINC00404-201ENST00000418660 FTHL17Q9BXU8 183 aa18.56■□□□□ 0.56
LINC00404-201ENST00000418660 PADI3Q9ULW8 664 aa18.56■□□□□ 0.56
LINC00404-201ENST00000418660 MTCH2Q9Y6C9 303 aa18.56■□□□□ 0.56
LINC00404-201ENST00000418660 TBX3O15119 743 aa18.55■□□□□ 0.56
LINC00404-201ENST00000418660 MMP1P03956 469 aa18.55■□□□□ 0.56
LINC00404-201ENST00000418660 PAK2Q13177 524 aa18.55■□□□□ 0.56
LINC00404-201ENST00000418660 NR5A1Q13285 461 aa18.55■□□□□ 0.56
LINC00404-201ENST00000418660 GRB10Q13322 594 aa18.55■□□□□ 0.56
LINC00404-201ENST00000418660 TRIM29Q14134 588 aa18.55■□□□□ 0.56
LINC00404-201ENST00000418660 FAM43BQ6ZT52 329 aaPredicted RBP18.55■□□□□ 0.56
LINC00404-201ENST00000418660 METTL13Q8N6R0 699 aa18.55■□□□□ 0.56
LINC00404-201ENST00000418660 RBM25P49756 843 aaKnown RBP18.54■□□□□ 0.56
LINC00404-201ENST00000418660 CRYBB1P53674 252 aaPredicted RBP18.54■□□□□ 0.56
LINC00404-201ENST00000418660 PPP2R5CQ13362 524 aa18.54■□□□□ 0.56
LINC00404-201ENST00000418660 XKR3Q5GH77 459 aa18.54■□□□□ 0.56
LINC00404-201ENST00000418660 KRT40Q6A162 431 aa18.54■□□□□ 0.56
LINC00404-201ENST00000418660 EFCAB12Q6NXP0 572 aa18.54■□□□□ 0.56
LINC00404-201ENST00000418660 RTN4RL1Q86UN2 441 aaPredicted RBP18.54■□□□□ 0.56
LINC00404-201ENST00000418660 LINC01465Q8N7H1 131 aa18.54■□□□□ 0.56
LINC00404-201ENST00000418660 ZSCAN31Q96LW9 406 aaPredicted RBP18.54■□□□□ 0.56
LINC00404-201ENST00000418660 SAMD11Q96NU1 681 aa18.54■□□□□ 0.56
LINC00404-201ENST00000418660 LLPHQ9BRT6 129 aaKnown RBP18.54■□□□□ 0.56
LINC00404-201ENST00000418660 SUGCTQ9HAC7 445 aa18.54■□□□□ 0.56
LINC00404-201ENST00000418660 CDHR5Q9HBB8 845 aa18.54■□□□□ 0.56
LINC00404-201ENST00000418660 MTUS1Q9ULD2 1270 aa18.54■□□□□ 0.56
LINC00404-201ENST00000418660 GINS2Q9Y248 185 aa18.54■□□□□ 0.56
LINC00404-201ENST00000418660 MYH9P35579 1960 aaKnown RBP18.53■□□□□ 0.56
LINC00404-201ENST00000418660 FAM205CA6NFA0 338 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 BTBD18B2RXH4 712 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 DLL1O00548 723 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 LPXNO60711 386 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 RPS6KA5O75582 802 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 TMOD1P28289 359 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 TARBP2Q15633 366 aaKnown RBP18.53■□□□□ 0.56
LINC00404-201ENST00000418660 KIZQ2M2Z5 673 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 ODR4Q5SWX8 454 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 CCDC83Q8IWF9 413 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 DIS3L2Q8IYB7 885 aaKnown RBP18.53■□□□□ 0.56
LINC00404-201ENST00000418660 ZNF710Q8N1W2 664 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 MICALL1Q8N3F8 863 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 LINC01599Q8WXQ3 324 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 HAS1Q92839 578 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 C17orf80Q9BSJ5 609 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 NIFKQ9BYG3 293 aaKnown RBP18.53■□□□□ 0.56
LINC00404-201ENST00000418660 LMCD1Q9NZU5 365 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 VAV3Q9UKW4 847 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 NOC2LQ9Y3T9 749 aaKnown RBP18.53■□□□□ 0.56
LINC00404-201ENST00000418660 COL4A6Q14031 1691 aa18.53■□□□□ 0.56
LINC00404-201ENST00000418660 MARCH6O60337 910 aa18.52■□□□□ 0.56
LINC00404-201ENST00000418660 GPR32O75388 356 aa18.52■□□□□ 0.56
LINC00404-201ENST00000418660 STBD1O95210 358 aa18.52■□□□□ 0.56
LINC00404-201ENST00000418660 BAG4O95429 457 aaKnown RBP18.52■□□□□ 0.56
LINC00404-201ENST00000418660 VTNP04004 478 aa18.52■□□□□ 0.56
LINC00404-201ENST00000418660 CLCN3P51790 818 aa18.52■□□□□ 0.56
LINC00404-201ENST00000418660 PSMC5P62195 406 aa18.52■□□□□ 0.56
LINC00404-201ENST00000418660 NFX1Q12986 1120 aaKnown RBP18.52■□□□□ 0.56
LINC00404-201ENST00000418660 TMEM266Q2M3C6 531 aa18.52■□□□□ 0.56
LINC00404-201ENST00000418660 POTEDQ86YR6 584 aa18.52■□□□□ 0.56
LINC00404-201ENST00000418660 TMEM40Q8WWA1 233 aa18.52■□□□□ 0.56
LINC00404-201ENST00000418660 MAP7D2Q96T17 732 aa18.52■□□□□ 0.56
LINC00404-201ENST00000418660 TSPYL2Q9H2G4 693 aaPredicted RBP18.52■□□□□ 0.56
LINC00404-201ENST00000418660 ERVK-5Q9HDB9 667 aa18.52■□□□□ 0.56
LINC00404-201ENST00000418660 PRDM6Q9NQX0 595 aa18.52■□□□□ 0.56
LINC00404-201ENST00000418660 SH2B1Q9NRF2 756 aaPredicted RBP18.52■□□□□ 0.56
LINC00404-201ENST00000418660 SEPT9Q9UHD8 586 aaPredicted RBP18.52■□□□□ 0.56
LINC00404-201ENST00000418660 EML1O00423 815 aa18.51■□□□□ 0.55
LINC00404-201ENST00000418660 GPR182O15218 404 aa18.51■□□□□ 0.55
LINC00404-201ENST00000418660 FOSBP53539 338 aa18.51■□□□□ 0.55
LINC00404-201ENST00000418660 TBC1D8BQ0IIM8 1120 aa18.51■□□□□ 0.55
LINC00404-201ENST00000418660 SLFN12Q8IYM2 578 aa18.51■□□□□ 0.55
LINC00404-201ENST00000418660 CRIPAKQ8N1N5 446 aa18.51■□□□□ 0.55
LINC00404-201ENST00000418660 LRRC71Q8N4P6 559 aa18.51■□□□□ 0.55
LINC00404-201ENST00000418660 FIBCD1Q8N539 461 aa18.51■□□□□ 0.55
LINC00404-201ENST00000418660 BANK1Q8NDB2 785 aa18.51■□□□□ 0.55
LINC00404-201ENST00000418660 FBXO22Q8NEZ5 403 aa18.51■□□□□ 0.55
LINC00404-201ENST00000418660 GDPD5Q8WTR4 605 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms