RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 C5orf67F2Z3F1 127 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 CSPG5O95196 566 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 PSAPP07602 524 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 IFNAR1P17181 557 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 NLRP5P59047 1200 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 NTRK3Q16288 839 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 PAN2Q504Q3 1202 aaKnown RBP16.02■□□□□ 0.16
LINC01006-202ENST00000418309 ZNF746Q6NUN9 644 aaPredicted RBP16.02■□□□□ 0.16
LINC01006-202ENST00000418309 RUFY3Q7L099 469 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 NPAS4Q8IUM7 802 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 KIAA0319LQ8IZA0 1049 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 METTL13Q8N6R0 699 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.02■□□□□ 0.16
LINC01006-202ENST00000418309 C1QTNF1Q9BXJ1 281 aa16.02■□□□□ 0.16
LINC01006-202ENST00000418309 KDM3AQ9Y4C1 1321 aa16.01■□□□□ 0.15
LINC01006-202ENST00000418309 H3BQ06 376 aaPredicted RBP16.01■□□□□ 0.15
LINC01006-202ENST00000418309 GRM6O15303 877 aa16.01■□□□□ 0.15
LINC01006-202ENST00000418309 RPS6KA5O75582 802 aa16.01■□□□□ 0.15
LINC01006-202ENST00000418309 ATP4AP20648 1035 aa16.01■□□□□ 0.15
LINC01006-202ENST00000418309 SSRP1Q08945 709 aaKnown RBP16.01■□□□□ 0.15
LINC01006-202ENST00000418309 PTCRAQ6ISU1 281 aaPredicted RBP16.01■□□□□ 0.15
LINC01006-202ENST00000418309 SMAP1Q8IYB5 467 aaPredicted RBP16.01■□□□□ 0.15
LINC01006-202ENST00000418309 TRIM22Q8IYM9 498 aa16.01■□□□□ 0.15
LINC01006-202ENST00000418309 BBXQ8WY36 941 aaPredicted RBP16.01■□□□□ 0.15
LINC01006-202ENST00000418309 CLP1Q92989 425 aaKnown RBP16.01■□□□□ 0.15
LINC01006-202ENST00000418309 PPP1R16BQ96T49 567 aa16.01■□□□□ 0.15
LINC01006-202ENST00000418309 LMAN2LQ9H0V9 348 aa16.01■□□□□ 0.15
LINC01006-202ENST00000418309 CDHR5Q9HBB8 845 aa16.01■□□□□ 0.15
LINC01006-202ENST00000418309 RC3H2Q9HBD1 1191 aaKnown RBP16.01■□□□□ 0.15
LINC01006-202ENST00000418309 CLDND1Q9NY35 253 aa16.01■□□□□ 0.15
LINC01006-202ENST00000418309 GABBR1Q9UBS5 961 aa16.01■□□□□ 0.15
LINC01006-202ENST00000418309 PCDHA10Q9Y5I2 948 aa16.01■□□□□ 0.15
LINC01006-202ENST00000418309 CYP46A1Q9Y6A2 500 aa16.01■□□□□ 0.15
LINC01006-202ENST00000418309 MYO7AQ13402 2215 aa16■□□□□ 0.15
LINC01006-202ENST00000418309 MUC3AQ02505 3323 aa16■□□□□ 0.15
LINC01006-202ENST00000418309 DENND3A2RUS2 1198 aa16■□□□□ 0.15
LINC01006-202ENST00000418309 CPLX1O14810 134 aa16■□□□□ 0.15
LINC01006-202ENST00000418309 LINC00271P0C7V0 271 aa16■□□□□ 0.15
LINC01006-202ENST00000418309 CIITAP33076 1130 aa16■□□□□ 0.15
LINC01006-202ENST00000418309 ODR4Q5SWX8 454 aa16■□□□□ 0.15
LINC01006-202ENST00000418309 CMTR2Q8IYT2 770 aaKnown RBP16■□□□□ 0.15
LINC01006-202ENST00000418309 PABPC5Q96DU9 382 aaKnown RBP16■□□□□ 0.15
LINC01006-202ENST00000418309 LARP6Q9BRS8 491 aaKnown RBP16■□□□□ 0.15
LINC01006-202ENST00000418309 PLVAPQ9BX97 442 aa16■□□□□ 0.15
LINC01006-202ENST00000418309 TMX1Q9H3N1 280 aa16■□□□□ 0.15
LINC01006-202ENST00000418309 EPHX3Q9H6B9 360 aa16■□□□□ 0.15
LINC01006-202ENST00000418309 ALG13Q9NP73 1137 aaKnown RBP16■□□□□ 0.15
LINC01006-202ENST00000418309 NOC2LQ9Y3T9 749 aaKnown RBP16■□□□□ 0.15
LINC01006-202ENST00000418309 PCDHB7Q9Y5E2 793 aa16■□□□□ 0.15
LINC01006-202ENST00000418309 MAFBQ9Y5Q3 323 aaPredicted RBP16■□□□□ 0.15
LINC01006-202ENST00000418309 MRPL42Q9Y6G3 142 aaKnown RBP16■□□□□ 0.15
LINC01006-202ENST00000418309 ZBTB42B2RXF5 422 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 GPR182O15218 404 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 NCK2O43639 380 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 IL9P15248 144 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 SSTR3P32745 418 aaPredicted RBP15.99■□□□□ 0.15
LINC01006-202ENST00000418309 USP11P51784 963 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 EVCP57679 992 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 TOB2Q14106 344 aaPredicted RBP15.99■□□□□ 0.15
LINC01006-202ENST00000418309 KIZQ2M2Z5 673 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 PUS10Q3MIT2 529 aaKnown RBP15.99■□□□□ 0.15
LINC01006-202ENST00000418309 ADAM2Q99965 735 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 IGFLR1Q9H665 355 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 ZSWIM6Q9HCJ5 1215 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 ERVK-5Q9HDB9 667 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 SH3GLB2Q9NR46 395 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 RAPGEFL1Q9UHV5 662 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 ST3GAL5Q9UNP4 418 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 CEP131Q9UPN4 1083 aa15.99■□□□□ 0.15
LINC01006-202ENST00000418309 BDP1A6H8Y1 2624 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 GRXCR2A6NFK2 248 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 WDR64B1ANS9 1081 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 CHMP2AO43633 222 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 GAS7O60861 476 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 C22orf31O95567 290 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 VTNP04004 478 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 SARSP49591 514 aaKnown RBP15.98■□□□□ 0.15
LINC01006-202ENST00000418309 GATMP50440 423 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 CRYBB1P53674 252 aaPredicted RBP15.98■□□□□ 0.15
LINC01006-202ENST00000418309 STK3Q13188 491 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 SPOUT1Q5T280 376 aaKnown RBP15.98■□□□□ 0.15
LINC01006-202ENST00000418309 FAM178BQ8IXR5 827 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 CRIPAKQ8N1N5 446 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 NEK9Q8TD19 979 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 TMEM40Q8WWA1 233 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 FAM167AQ96KS9 214 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 OSMRQ99650 979 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 DISC1Q9NRI5 854 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 NRBP2Q9NSY0 501 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 PLAGL2Q9UPG8 496 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 AKT3Q9Y243 479 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 FAM50BQ9Y247 325 aa15.98■□□□□ 0.15
LINC01006-202ENST00000418309 MSH4O15457 936 aa15.97■□□□□ 0.15
LINC01006-202ENST00000418309 MAGEB2O15479 319 aa15.97■□□□□ 0.15
LINC01006-202ENST00000418309 EPB41L2O43491 1005 aaKnown RBP15.97■□□□□ 0.15
LINC01006-202ENST00000418309 MGEA5O60502 916 aa15.97■□□□□ 0.15
LINC01006-202ENST00000418309 TMOD1P28289 359 aa15.97■□□□□ 0.15
LINC01006-202ENST00000418309 CLCN3P51790 818 aa15.97■□□□□ 0.15
LINC01006-202ENST00000418309 NAALADL2Q58DX5 795 aa15.97■□□□□ 0.15
LINC01006-202ENST00000418309 LRCH2Q5VUJ6 765 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms