RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 UIMC1Q96RL1 719 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 ERVK-5Q9HDB9 667 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 ZNF302Q9NR11 478 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 PRKAG3Q9UGI9 489 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 GINS2Q9Y248 185 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 NOC2LQ9Y3T9 749 aaKnown RBP16.85■□□□□ 0.29
RPS28-201ENST00000417088 COL1A2P08123 1366 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 LOXHD1Q8IVV2 1947 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 CCDC196A0A1B0GTZ2 297 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 ESYT2A0FGR8 921 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 C19orf67A6NJJ6 358 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 ZBTB42B2RXF5 422 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 IPO5O00410 1097 aaKnown RBP16.84■□□□□ 0.29
RPS28-201ENST00000417088 MGEA5O60502 916 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 ALADP13716 330 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 CLUL1Q15846 466 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 PKN1Q16512 942 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 KLHL23Q8NBE8 558 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 TMEM40Q8WWA1 233 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 ZMYND12Q9H0C1 365 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 IGFLR1Q9H665 355 aa16.84■□□□□ 0.29
RPS28-201ENST00000417088 PRR33A8MZF0 331 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 LINC01565O15544 149 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 MBTPS2O43462 519 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 TBX10O75333 385 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 RPS6KA5O75582 802 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 IRS1P35568 1242 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 SARSP49591 514 aaKnown RBP16.83■□□□□ 0.28
RPS28-201ENST00000417088 FGD1P98174 961 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 ADAM15Q13444 863 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 MCTP2Q6DN12 878 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 FAM43BQ6ZT52 329 aaPredicted RBP16.83■□□□□ 0.28
RPS28-201ENST00000417088 Q6ZUG5 572 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 ADHFE1Q8IWW8 467 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 BRF1Q92994 677 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 ZNF577Q9BSK1 485 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 C6orf50Q9HD87 102 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 TBC1D22BQ9NU19 505 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 LRFN2Q9ULH4 789 aa16.83■□□□□ 0.28
RPS28-201ENST00000417088 MAFBQ9Y5Q3 323 aaPredicted RBP16.83■□□□□ 0.28
RPS28-201ENST00000417088 PRPF3O43395 683 aaKnown RBP16.82■□□□□ 0.28
RPS28-201ENST00000417088 C22orf31O95567 290 aa16.82■□□□□ 0.28
RPS28-201ENST00000417088 IBSPP21815 317 aaPredicted RBP16.82■□□□□ 0.28
RPS28-201ENST00000417088 SMAD2Q15796 467 aaKnown RBP16.82■□□□□ 0.28
RPS28-201ENST00000417088 ZNF746Q6NUN9 644 aaPredicted RBP16.82■□□□□ 0.28
RPS28-201ENST00000417088 ADGRD2Q7Z7M1 963 aa16.82■□□□□ 0.28
RPS28-201ENST00000417088 REXO1Q8N1G1 1221 aaKnown RBP16.82■□□□□ 0.28
RPS28-201ENST00000417088 POF1BQ8WVV4 589 aa16.82■□□□□ 0.28
RPS28-201ENST00000417088 ADAM2Q99965 735 aa16.82■□□□□ 0.28
RPS28-201ENST00000417088 RGS18Q9NS28 235 aa16.82■□□□□ 0.28
RPS28-201ENST00000417088 ST3GAL5Q9UNP4 418 aa16.82■□□□□ 0.28
RPS28-201ENST00000417088 PCDHB7Q9Y5E2 793 aa16.82■□□□□ 0.28
RPS28-201ENST00000417088 NID2Q14112 1375 aa16.81■□□□□ 0.28
RPS28-201ENST00000417088 C9IYK1 514 aa16.81■□□□□ 0.28
RPS28-201ENST00000417088 DCXO43602 365 aa16.81■□□□□ 0.28
RPS28-201ENST00000417088 CRYBB1P53674 252 aaPredicted RBP16.81■□□□□ 0.28
RPS28-201ENST00000417088 SETQ01105 290 aaPredicted RBP16.81■□□□□ 0.28
RPS28-201ENST00000417088 KIZQ2M2Z5 673 aa16.81■□□□□ 0.28
RPS28-201ENST00000417088 ODR4Q5SWX8 454 aa16.81■□□□□ 0.28
RPS28-201ENST00000417088 CKAP2LQ8IYA6 745 aa16.81■□□□□ 0.28
RPS28-201ENST00000417088 CCDC12Q8WUD4 166 aaPredicted RBP16.81■□□□□ 0.28
RPS28-201ENST00000417088 BBXQ8WY36 941 aaPredicted RBP16.81■□□□□ 0.28
RPS28-201ENST00000417088 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
RPS28-201ENST00000417088 PPP1R16BQ96T49 567 aa16.81■□□□□ 0.28
RPS28-201ENST00000417088 C1orf112Q9NSG2 853 aa16.81■□□□□ 0.28
RPS28-201ENST00000417088 CD207Q9UJ71 328 aa16.81■□□□□ 0.28
RPS28-201ENST00000417088 SNX14Q9Y5W7 946 aa16.81■□□□□ 0.28
RPS28-201ENST00000417088 MUC6Q6W4X9 2439 aa16.81■□□□□ 0.28
RPS28-201ENST00000417088 EVPLQ92817 2033 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 KIAA1671Q9BY89 1806 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 DENND3A2RUS2 1198 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 GPR182O15218 404 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 GNA11P29992 359 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 CIITAP33076 1130 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 HSPA4P34932 840 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 SMAD4Q13485 552 aaKnown RBP16.8■□□□□ 0.28
RPS28-201ENST00000417088 PRR16Q569H4 304 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 BLOC1S2Q6QNY1 142 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 SLC24A5Q71RS6 500 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 TRMT1LQ7Z2T5 733 aaKnown RBP16.8■□□□□ 0.28
RPS28-201ENST00000417088 FAM228AQ86W67 206 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 SMAP1Q8IYB5 467 aaPredicted RBP16.8■□□□□ 0.28
RPS28-201ENST00000417088 EFHBQ8N7U6 833 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 RASGRP4Q8TDF6 673 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 PHKBQ93100 1093 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 PPP2R3CQ969Q6 453 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 MSLNLQ96KJ4 702 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 OSMRQ99650 979 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 GABBR1Q9UBS5 961 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 PCDHA10Q9Y5I2 948 aa16.8■□□□□ 0.28
RPS28-201ENST00000417088 TBKBP1A7MCY6 615 aa16.79■□□□□ 0.28
RPS28-201ENST00000417088 EDIL3O43854 480 aa16.79■□□□□ 0.28
RPS28-201ENST00000417088 PPFIA3O75145 1194 aa16.79■□□□□ 0.28
RPS28-201ENST00000417088 GPR32O75388 356 aa16.79■□□□□ 0.28
RPS28-201ENST00000417088 VTNP04004 478 aa16.79■□□□□ 0.28
RPS28-201ENST00000417088 PSAPP07602 524 aa16.79■□□□□ 0.28
RPS28-201ENST00000417088 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
RPS28-201ENST00000417088 NRIP1P48552 1158 aa16.79■□□□□ 0.28
RPS28-201ENST00000417088 NDUFV1P49821 464 aa16.79■□□□□ 0.28
RPS28-201ENST00000417088 FAM189BP81408 668 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms