RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 TIGD5Q53EQ6 642 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 ZNF484Q5JVG2 852 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 SMAP1Q8IYB5 467 aaPredicted RBP17.6■□□□□ 0.41
ACTB-202ENST00000414620 NME8Q8N427 588 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 BANK1Q8NDB2 785 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 BBXQ8WY36 941 aaPredicted RBP17.6■□□□□ 0.41
ACTB-202ENST00000414620 ZNF689Q96CS4 500 aaPredicted RBP17.6■□□□□ 0.41
ACTB-202ENST00000414620 FTHL17Q9BXU8 183 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 TMX1Q9H3N1 280 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 CDHR5Q9HBB8 845 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 PDRG1Q9NUG6 133 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 PCDHA10Q9Y5I2 948 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 SQORQ9Y6N5 450 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 KDM3AQ9Y4C1 1321 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 TTC28Q96AY4 2481 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 MSH4O15457 936 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 EPB41L2O43491 1005 aaKnown RBP17.59■□□□□ 0.41
ACTB-202ENST00000414620 DGKIO75912 1065 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 C22orf31O95567 290 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 KCNA5P22460 613 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 GATMP50440 423 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 TCEAL5Q5H9L2 206 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 EP400NLQ6ZTU2 488 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 KIAA0319LQ8IZA0 1049 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 METTL13Q8N6R0 699 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 TBCKQ8TEA7 893 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 TMEM40Q8WWA1 233 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 OSMRQ99650 979 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 ERVK-5Q9HDB9 667 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 SH3GLB2Q9NR46 395 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 PCDHA4Q9UN74 947 aa17.59■□□□□ 0.41
ACTB-202ENST00000414620 NOC2LQ9Y3T9 749 aaKnown RBP17.59■□□□□ 0.41
ACTB-202ENST00000414620 MAFBQ9Y5Q3 323 aaPredicted RBP17.59■□□□□ 0.41
ACTB-202ENST00000414620 GRM6O15303 877 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 MGEA5O60502 916 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 GAS7O60861 476 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 RPS6KA5O75582 802 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 DEXIO95424 95 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 TDP2O95551 362 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 VTNP04004 478 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 BMPR1AP36894 532 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 CLCN3P51790 818 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 UGCGQ16739 394 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 KIZQ2M2Z5 673 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 NPAS4Q8IUM7 802 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 ZNF274Q96GC6 653 aaPredicted RBP17.58■□□□□ 0.4
ACTB-202ENST00000414620 TM6SF1Q9BZW5 370 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 NSUN3Q9H649 340 aaKnown RBP17.58■□□□□ 0.4
ACTB-202ENST00000414620 LRFN2Q9ULH4 789 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 MRPL42Q9Y6G3 142 aaKnown RBP17.58■□□□□ 0.4
ACTB-202ENST00000414620 XIRP2A4UGR9 3374 aa17.58■□□□□ 0.4
ACTB-202ENST00000414620 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.57■□□□□ 0.4
ACTB-202ENST00000414620 WDR64B1ANS9 1081 aa17.57■□□□□ 0.4
ACTB-202ENST00000414620 LRCH2Q5VUJ6 765 aa17.57■□□□□ 0.4
ACTB-202ENST00000414620 BLIDQ8IZY5 108 aa17.57■□□□□ 0.4
ACTB-202ENST00000414620 C11orf84Q9BUA3 381 aaPredicted RBP17.57■□□□□ 0.4
ACTB-202ENST00000414620 TEKT3Q9BXF9 490 aa17.57■□□□□ 0.4
ACTB-202ENST00000414620 UNC45AQ9H3U1 944 aa17.57■□□□□ 0.4
ACTB-202ENST00000414620 DISC1Q9NRI5 854 aa17.57■□□□□ 0.4
ACTB-202ENST00000414620 RWDD3Q9Y3V2 267 aa17.57■□□□□ 0.4
ACTB-202ENST00000414620 C5orf67F2Z3F1 127 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 ZNF862O60290 1169 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 OATP04181 439 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 RB1P06400 928 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 STAG3L1P0CL83 205 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 IL9P15248 144 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 USP11P51784 963 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 PRKCEQ02156 737 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 SCRN1Q12765 414 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 CPLX2Q6PUV4 134 aaKnown RBP17.56■□□□□ 0.4
ACTB-202ENST00000414620 FAM228AQ86W67 206 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 CMTR2Q8IYT2 770 aaKnown RBP17.56■□□□□ 0.4
ACTB-202ENST00000414620 LRRC71Q8N4P6 559 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 SLC5A5Q92911 643 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 CLP1Q92989 425 aaKnown RBP17.56■□□□□ 0.4
ACTB-202ENST00000414620 ZNF668Q96K58 619 aaPredicted RBP17.56■□□□□ 0.4
ACTB-202ENST00000414620 FAM167AQ96KS9 214 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 ALG13Q9NP73 1137 aaKnown RBP17.56■□□□□ 0.4
ACTB-202ENST00000414620 ST3GAL5Q9UNP4 418 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 KCNJ14Q9UNX9 436 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 CEP131Q9UPN4 1083 aa17.56■□□□□ 0.4
ACTB-202ENST00000414620 DENND3A2RUS2 1198 aa17.55■□□□□ 0.4
ACTB-202ENST00000414620 H3BQ06 376 aaPredicted RBP17.55■□□□□ 0.4
ACTB-202ENST00000414620 SARSP49591 514 aaKnown RBP17.55■□□□□ 0.4
ACTB-202ENST00000414620 NPY5RQ15761 445 aa17.55■□□□□ 0.4
ACTB-202ENST00000414620 LEXMQ3ZCV2 418 aa17.55■□□□□ 0.4
ACTB-202ENST00000414620 CRIPAKQ8N1N5 446 aa17.55■□□□□ 0.4
ACTB-202ENST00000414620 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.55■□□□□ 0.4
ACTB-202ENST00000414620 ADAM2Q99965 735 aa17.55■□□□□ 0.4
ACTB-202ENST00000414620 AKT3Q9Y243 479 aa17.55■□□□□ 0.4
ACTB-202ENST00000414620 ARID2Q68CP9 1835 aa17.55■□□□□ 0.4
ACTB-202ENST00000414620 M0R2N6 131 aa17.54■□□□□ 0.4
ACTB-202ENST00000414620 GPR32O75388 356 aa17.54■□□□□ 0.4
ACTB-202ENST00000414620 JAK3P52333 1124 aa17.54■□□□□ 0.4
ACTB-202ENST00000414620 CRYBB1P53674 252 aaPredicted RBP17.54■□□□□ 0.4
ACTB-202ENST00000414620 INF2Q27J81 1249 aa17.54■□□□□ 0.4
ACTB-202ENST00000414620 PTCRAQ6ISU1 281 aaPredicted RBP17.54■□□□□ 0.4
ACTB-202ENST00000414620 EFCAB12Q6NXP0 572 aa17.54■□□□□ 0.4
ACTB-202ENST00000414620 MIER3Q7Z3K6 550 aa17.54■□□□□ 0.4
ACTB-202ENST00000414620 DAGLBQ8NCG7 672 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms