RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 KRT40Q6A162 431 aa29.68■■■□□ 2.34
VEGFA-207ENST00000413642 NME8Q8N427 588 aa29.68■■■□□ 2.34
VEGFA-207ENST00000413642 PRDM6Q9NQX0 595 aa29.68■■■□□ 2.34
VEGFA-207ENST00000413642 MTUS1Q9ULD2 1270 aa29.68■■■□□ 2.34
VEGFA-207ENST00000413642 GINS2Q9Y248 185 aa29.68■■■□□ 2.34
VEGFA-207ENST00000413642 CDH23Q9H251 3354 aa29.67■■■□□ 2.34
VEGFA-207ENST00000413642 BTBD18B2RXH4 712 aa29.67■■■□□ 2.34
VEGFA-207ENST00000413642 M0QZ92 97 aa29.67■■■□□ 2.34
VEGFA-207ENST00000413642 ENPP3O14638 875 aa29.67■■■□□ 2.34
VEGFA-207ENST00000413642 OATP04181 439 aa29.67■■■□□ 2.34
VEGFA-207ENST00000413642 RPLP2P05387 115 aaKnown RBP29.67■■■□□ 2.34
VEGFA-207ENST00000413642 HTRA4P83105 476 aaPredicted RBP29.67■■■□□ 2.34
VEGFA-207ENST00000413642 LINC01599Q8WXQ3 324 aa29.67■■■□□ 2.34
VEGFA-207ENST00000413642 KCNMB3Q9NPA1 279 aa29.67■■■□□ 2.34
VEGFA-207ENST00000413642 KAT6AQ92794 2004 aa29.66■■■□□ 2.34
VEGFA-207ENST00000413642 EML1O00423 815 aa29.66■■■□□ 2.34
VEGFA-207ENST00000413642 MMP1P03956 469 aa29.66■■■□□ 2.34
VEGFA-207ENST00000413642 TMEM266Q2M3C6 531 aa29.66■■■□□ 2.34
VEGFA-207ENST00000413642 PPP4R3AQ6IN85 833 aa29.66■■■□□ 2.34
VEGFA-207ENST00000413642 RTN4RL1Q86UN2 441 aaPredicted RBP29.66■■■□□ 2.34
VEGFA-207ENST00000413642 METTL13Q8N6R0 699 aa29.66■■■□□ 2.34
VEGFA-207ENST00000413642 FAM167AQ96KS9 214 aa29.66■■■□□ 2.34
VEGFA-207ENST00000413642 INSL6Q9Y581 213 aa29.66■■■□□ 2.34
VEGFA-207ENST00000413642 TMEM150BA6NC51 233 aa29.65■■■□□ 2.34
VEGFA-207ENST00000413642 RBM25P49756 843 aaKnown RBP29.65■■■□□ 2.34
VEGFA-207ENST00000413642 GUCY1B3Q02153 619 aa29.65■■■□□ 2.34
VEGFA-207ENST00000413642 DIS3L2Q8IYB7 885 aaKnown RBP29.65■■■□□ 2.34
VEGFA-207ENST00000413642 HAS1Q92839 578 aa29.65■■■□□ 2.34
VEGFA-207ENST00000413642 NRBP2Q9NSY0 501 aa29.65■■■□□ 2.34
VEGFA-207ENST00000413642 VAV3Q9UKW4 847 aa29.65■■■□□ 2.34
VEGFA-207ENST00000413642 PADI3Q9ULW8 664 aa29.65■■■□□ 2.34
VEGFA-207ENST00000413642 SIP14410 1827 aa29.65■■■□□ 2.34
VEGFA-207ENST00000413642 WNT7AO00755 349 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 STBD1O95210 358 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 VTNP04004 478 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 GCFC2P16383 781 aaKnown RBP29.64■■■□□ 2.34
VEGFA-207ENST00000413642 CLCN3P51790 818 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 POTEDQ86YR6 584 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 MICALL1Q8N3F8 863 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 LRRC71Q8N4P6 559 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 BANK1Q8NDB2 785 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 RDM1Q8NG50 284 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 TMEM40Q8WWA1 233 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 SH2D3AQ9BRG2 576 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 BRMS1Q9HCU9 246 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 SQORQ9Y6N5 450 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 KDM3AQ9Y4C1 1321 aa29.64■■■□□ 2.34
VEGFA-207ENST00000413642 GRB10Q13322 594 aa29.63■■■□□ 2.33
VEGFA-207ENST00000413642 SP7Q8TDD2 431 aaPredicted RBP29.63■■■□□ 2.33
VEGFA-207ENST00000413642 FAM20AQ96MK3 541 aa29.63■■■□□ 2.33
VEGFA-207ENST00000413642 YME1L1Q96TA2 773 aa29.63■■■□□ 2.33
VEGFA-207ENST00000413642 C17orf80Q9BSJ5 609 aa29.63■■■□□ 2.33
VEGFA-207ENST00000413642 TMX1Q9H3N1 280 aa29.63■■■□□ 2.33
VEGFA-207ENST00000413642 CEP131Q9UPN4 1083 aa29.63■■■□□ 2.33
VEGFA-207ENST00000413642 NOC2LQ9Y3T9 749 aaKnown RBP29.63■■■□□ 2.33
VEGFA-207ENST00000413642 LPXNO60711 386 aa29.62■■■□□ 2.33
VEGFA-207ENST00000413642 ERVK-21P61565 698 aa29.62■■■□□ 2.33
VEGFA-207ENST00000413642 PAK2Q13177 524 aa29.62■■■□□ 2.33
VEGFA-207ENST00000413642 TRIM29Q14134 588 aa29.62■■■□□ 2.33
VEGFA-207ENST00000413642 KIZQ2M2Z5 673 aa29.62■■■□□ 2.33
VEGFA-207ENST00000413642 EFCAB12Q6NXP0 572 aa29.62■■■□□ 2.33
VEGFA-207ENST00000413642 LINC01465Q8N7H1 131 aa29.62■■■□□ 2.33
VEGFA-207ENST00000413642 GDPD5Q8WTR4 605 aa29.62■■■□□ 2.33
VEGFA-207ENST00000413642 TGS1Q96RS0 853 aaKnown RBP29.62■■■□□ 2.33
VEGFA-207ENST00000413642 MTCH2Q9Y6C9 303 aa29.62■■■□□ 2.33
VEGFA-207ENST00000413642 MICAL3Q7RTP6 2002 aa29.62■■■□□ 2.33
VEGFA-207ENST00000413642 NFX1Q12986 1120 aaKnown RBP29.61■■■□□ 2.33
VEGFA-207ENST00000413642 ZNF668Q96K58 619 aaPredicted RBP29.61■■■□□ 2.33
VEGFA-207ENST00000413642 ZSCAN31Q96LW9 406 aaPredicted RBP29.61■■■□□ 2.33
VEGFA-207ENST00000413642 OSMRQ99650 979 aa29.61■■■□□ 2.33
VEGFA-207ENST00000413642 SUGCTQ9HAC7 445 aa29.61■■■□□ 2.33
VEGFA-207ENST00000413642 SEPT9Q9UHD8 586 aaPredicted RBP29.61■■■□□ 2.33
VEGFA-207ENST00000413642 MAGEB2O15479 319 aa29.6■■■□□ 2.33
VEGFA-207ENST00000413642 PPP2R5CQ13362 524 aa29.6■■■□□ 2.33
VEGFA-207ENST00000413642 TARBP2Q15633 366 aaKnown RBP29.6■■■□□ 2.33
VEGFA-207ENST00000413642 MTERF2Q49AM1 385 aa29.6■■■□□ 2.33
VEGFA-207ENST00000413642 NAP1L4Q99733 375 aaKnown RBP29.6■■■□□ 2.33
VEGFA-207ENST00000413642 LLPHQ9BRT6 129 aaKnown RBP29.6■■■□□ 2.33
VEGFA-207ENST00000413642 ERVK-5Q9HDB9 667 aa29.6■■■□□ 2.33
VEGFA-207ENST00000413642 DDX11L8A8MPP1 907 aa29.59■■■□□ 2.33
VEGFA-207ENST00000413642 MARCH6O60337 910 aa29.59■■■□□ 2.33
VEGFA-207ENST00000413642 GPR32O75388 356 aa29.59■■■□□ 2.33
VEGFA-207ENST00000413642 XKR3Q5GH77 459 aa29.59■■■□□ 2.33
VEGFA-207ENST00000413642 CEP89Q96ST8 783 aa29.59■■■□□ 2.33
VEGFA-207ENST00000413642 NIFKQ9BYG3 293 aaKnown RBP29.59■■■□□ 2.33
VEGFA-207ENST00000413642 CHD7Q9P2D1 2997 aa29.59■■■□□ 2.33
VEGFA-207ENST00000413642 TBX3O15119 743 aa29.58■■■□□ 2.33
VEGFA-207ENST00000413642 MGEA5O60502 916 aa29.58■■■□□ 2.33
VEGFA-207ENST00000413642 RPS6KA5O75582 802 aa29.58■■■□□ 2.33
VEGFA-207ENST00000413642 DRP2Q13474 957 aa29.58■■■□□ 2.33
VEGFA-207ENST00000413642 WRAP73Q9P2S5 460 aaPredicted RBP29.58■■■□□ 2.33
VEGFA-207ENST00000413642 AKT3Q9Y243 479 aa29.58■■■□□ 2.33
VEGFA-207ENST00000413642 POU3F3P20264 500 aaPredicted RBP29.57■■■□□ 2.32
VEGFA-207ENST00000413642 IBSPP21815 317 aaPredicted RBP29.57■■■□□ 2.32
VEGFA-207ENST00000413642 CRYBB1P53674 252 aaPredicted RBP29.57■■■□□ 2.32
VEGFA-207ENST00000413642 NLRP11P59045 1033 aaKnown RBP29.57■■■□□ 2.32
VEGFA-207ENST00000413642 PSMC5P62195 406 aa29.57■■■□□ 2.32
VEGFA-207ENST00000413642 TBC1D8BQ0IIM8 1120 aa29.57■■■□□ 2.32
VEGFA-207ENST00000413642 C8orf76Q96K31 380 aa29.57■■■□□ 2.32
VEGFA-207ENST00000413642 ADAMTS10Q9H324 1103 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms