RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ADAM2Q99965 735 aa19.03■□□□□ 0.64
MRPL55-220ENST00000411464 ERVK-5Q9HDB9 667 aa19.03■□□□□ 0.64
MRPL55-220ENST00000411464 C1orf112Q9NSG2 853 aa19.03■□□□□ 0.64
MRPL55-220ENST00000411464 BARX2Q9UMQ3 279 aaPredicted RBP19.03■□□□□ 0.64
MRPL55-220ENST00000411464 NOC2LQ9Y3T9 749 aaKnown RBP19.03■□□□□ 0.64
MRPL55-220ENST00000411464 TTC3P53804 2025 aa19.03■□□□□ 0.64
MRPL55-220ENST00000411464 IGKV6D-21A0A0A0MT36 114 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 TBKBP1A7MCY6 615 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 CCNE2O96020 404 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 SREBF1P36956 1147 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 AP3B2Q13367 1082 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 RTN1Q16799 776 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 ZNF484Q5JVG2 852 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 RNF20Q5VTR2 975 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 TYW1BQ6NUM6 668 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 PDXDC2PQ6P474 469 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 APOA5Q6Q788 366 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 ABHD15Q6UXT9 468 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 CDHR5Q9HBB8 845 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 RGS18Q9NS28 235 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 TMEM260Q9NX78 707 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 ST3GAL5Q9UNP4 418 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 PCDHGC5Q9Y5F6 944 aa19.02■□□□□ 0.64
MRPL55-220ENST00000411464 CNTNAP5Q8WYK1 1306 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 NLRC5Q86WI3 1866 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 C5orf42Q9H799 3197 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 FSD2A1L4K1 749 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 LOC730098B7Z3J9 87 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 hCG_1984214I3L0E3 225 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 PER2O15055 1255 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 MGEA5O60502 916 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 FAM102BQ5T8I3 360 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 SWSAP1Q6NVH7 229 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 MIS18BP1Q6P0N0 1132 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 NIPA1Q7RTP0 329 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 BMP8AQ7Z5Y6 402 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 CKAP2LQ8IYA6 745 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 THNSL1Q8IYQ7 743 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 ZNF713Q8N859 430 aaPredicted RBP19.01■□□□□ 0.63
MRPL55-220ENST00000411464 PBXIP1Q96AQ6 731 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 NEK1Q96PY6 1258 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 ZNF302Q9NR11 478 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 TLR9Q9NR96 1032 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 BARHL2Q9NY43 387 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 USP15Q9Y4E8 981 aaPredicted RBP19.01■□□□□ 0.63
MRPL55-220ENST00000411464 KAT6AQ92794 2004 aa19.01■□□□□ 0.63
MRPL55-220ENST00000411464 TMEM221A6NGB7 291 aa19■□□□□ 0.63
MRPL55-220ENST00000411464 M0R296 226 aa19■□□□□ 0.63
MRPL55-220ENST00000411464 ZBTB43O43298 467 aa19■□□□□ 0.63
MRPL55-220ENST00000411464 FGF18O76093 207 aa19■□□□□ 0.63
MRPL55-220ENST00000411464 GLP2RO95838 553 aa19■□□□□ 0.63
MRPL55-220ENST00000411464 PKN1Q16512 942 aa19■□□□□ 0.63
MRPL55-220ENST00000411464 PDE12Q6L8Q7 609 aaKnown RBP19■□□□□ 0.63
MRPL55-220ENST00000411464 TRIM67Q6ZTA4 783 aa19■□□□□ 0.63
MRPL55-220ENST00000411464 PLA2G4DQ86XP0 818 aa19■□□□□ 0.63
MRPL55-220ENST00000411464 CDCA3Q99618 268 aaPredicted RBP19■□□□□ 0.63
MRPL55-220ENST00000411464 PHF7Q9BWX1 381 aaPredicted RBP19■□□□□ 0.63
MRPL55-220ENST00000411464 ATP6V0A4Q9HBG4 840 aa19■□□□□ 0.63
MRPL55-220ENST00000411464 TYW1Q9NV66 732 aaKnown RBP19■□□□□ 0.63
MRPL55-220ENST00000411464 COL1A2P08123 1366 aa19■□□□□ 0.63
MRPL55-220ENST00000411464 C9IYK1 514 aa18.99■□□□□ 0.63
MRPL55-220ENST00000411464 IPO5O00410 1097 aaKnown RBP18.99■□□□□ 0.63
MRPL55-220ENST00000411464 CRYBB1P53674 252 aaPredicted RBP18.99■□□□□ 0.63
MRPL55-220ENST00000411464 FUT2Q10981 343 aa18.99■□□□□ 0.63
MRPL55-220ENST00000411464 CBX2Q14781 532 aaPredicted RBP18.99■□□□□ 0.63
MRPL55-220ENST00000411464 CCDC60Q8IWA6 550 aaPredicted RBP18.99■□□□□ 0.63
MRPL55-220ENST00000411464 METTL13Q8N6R0 699 aa18.99■□□□□ 0.63
MRPL55-220ENST00000411464 TMEM40Q8WWA1 233 aa18.99■□□□□ 0.63
MRPL55-220ENST00000411464 PPP1R16BQ96T49 567 aa18.99■□□□□ 0.63
MRPL55-220ENST00000411464 TMEM161AQ9NX61 479 aa18.99■□□□□ 0.63
MRPL55-220ENST00000411464 TRIOO75962 3097 aa18.99■□□□□ 0.63
MRPL55-220ENST00000411464 FAM86B1E9PN63 330 aa18.98■□□□□ 0.63
MRPL55-220ENST00000411464 DHX15O43143 795 aaKnown RBP18.98■□□□□ 0.63
MRPL55-220ENST00000411464 FAM86B2P0C5J1 330 aa18.98■□□□□ 0.63
MRPL55-220ENST00000411464 SRGAP2BP0DMP2 458 aa18.98■□□□□ 0.63
MRPL55-220ENST00000411464 CLK2P49760 499 aaKnown RBP18.98■□□□□ 0.63
MRPL55-220ENST00000411464 IRX6P78412 446 aaPredicted RBP18.98■□□□□ 0.63
MRPL55-220ENST00000411464 ZXDAP98168 799 aa18.98■□□□□ 0.63
MRPL55-220ENST00000411464 KIZQ2M2Z5 673 aa18.98■□□□□ 0.63
MRPL55-220ENST00000411464 JAKMIP3Q5VZ66 844 aa18.98■□□□□ 0.63
MRPL55-220ENST00000411464 DHX32Q7L7V1 743 aaKnown RBP18.98■□□□□ 0.63
MRPL55-220ENST00000411464 TRMT1LQ7Z2T5 733 aaKnown RBP18.98■□□□□ 0.63
MRPL55-220ENST00000411464 SUGP1Q8IWZ8 645 aaKnown RBP18.98■□□□□ 0.63
MRPL55-220ENST00000411464 COLGALT1Q8NBJ5 622 aa18.98■□□□□ 0.63
MRPL55-220ENST00000411464 BBXQ8WY36 941 aaPredicted RBP18.98■□□□□ 0.63
MRPL55-220ENST00000411464 RPGRIP1Q96KN7 1286 aa18.98■□□□□ 0.63
MRPL55-220ENST00000411464 OSMRQ99650 979 aa18.98■□□□□ 0.63
MRPL55-220ENST00000411464 PUF60Q9UHX1 559 aaKnown RBP18.98■□□□□ 0.63
MRPL55-220ENST00000411464 BRPF3Q9ULD4 1205 aa18.98■□□□□ 0.63
MRPL55-220ENST00000411464 WDFY4Q6ZS81 3184 aa18.98■□□□□ 0.63
MRPL55-220ENST00000411464 GOLGA8AA7E2F4 631 aa18.97■□□□□ 0.63
MRPL55-220ENST00000411464 GOLGA8BA8MQT2 603 aa18.97■□□□□ 0.63
MRPL55-220ENST00000411464 ATF7P17544 494 aaPredicted RBP18.97■□□□□ 0.63
MRPL55-220ENST00000411464 LAG3P18627 525 aa18.97■□□□□ 0.63
MRPL55-220ENST00000411464 ERVFC1P60507 584 aa18.97■□□□□ 0.63
MRPL55-220ENST00000411464 FAM189BP81408 668 aa18.97■□□□□ 0.63
MRPL55-220ENST00000411464 EXOSC10Q01780 885 aaKnown RBP18.97■□□□□ 0.63
MRPL55-220ENST00000411464 DUSP6Q16828 381 aa18.97■□□□□ 0.63
MRPL55-220ENST00000411464 TCEANC2Q96MN5 208 aa18.97■□□□□ 0.63
MRPL55-220ENST00000411464 PRRX2Q99811 253 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms