RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 RGL1Q9NZL6 768 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 OGFRQ9NZT2 677 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 REXO2Q9Y3B8 237 aaKnown RBP14.92□□□□□ -0.02
LIMS1-205ENST00000410093 RBAK-RBAKDNI3L0D1 243 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 ATP2A1O14983 1001 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 STAM2O75886 525 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 GCNT3O95395 438 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 AFPP02771 609 aaKnown RBP14.92□□□□□ -0.02
LIMS1-205ENST00000410093 XRCC5P13010 732 aaKnown RBP14.92□□□□□ -0.02
LIMS1-205ENST00000410093 VCAM1P19320 739 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 JAK3P52333 1124 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 HERVK_113P62684 666 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 CKAP4Q07065 602 aaKnown RBP14.92□□□□□ -0.02
LIMS1-205ENST00000410093 KCNMA1Q12791 1236 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 TTLL12Q14166 644 aaPredicted RBP14.92□□□□□ -0.02
LIMS1-205ENST00000410093 SFMBT2Q5VUG0 894 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 RRAGAQ7L523 313 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 MIER3Q7Z3K6 550 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 CDAN1Q8IWY9 1227 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 RNF10Q8N5U6 811 aaKnown RBP14.92□□□□□ -0.02
LIMS1-205ENST00000410093 ZNF280CQ8ND82 737 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 GLIS3Q8NEA6 775 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 CCDC102AQ96A19 550 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 AGBL1Q96MI9 1066 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 IWS1Q96ST2 819 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 RUSC1Q9BVN2 902 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 UNC45AQ9H3U1 944 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 AGO4Q9HCK5 861 aaKnown RBP14.92□□□□□ -0.02
LIMS1-205ENST00000410093 KCNH7Q9NS40 1196 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 WBP1LQ9NX94 342 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 AIPL1Q9NZN9 384 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 TBC1D7Q9P0N9 293 aa14.92□□□□□ -0.02
LIMS1-205ENST00000410093 POLR2AP24928 1970 aaKnown RBP14.91□□□□□ -0.02
LIMS1-205ENST00000410093 ARHGEF35A5YM69 484 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 PJA2O43164 708 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 AKR1B10O60218 316 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 NR3C1P04150 777 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 ARP10275 920 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 PRLRP16471 622 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 KLK7P49862 253 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 ZNF157P51786 506 aaPredicted RBP14.91□□□□□ -0.02
LIMS1-205ENST00000410093 CHMP4BP1P59074 171 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 FKBP1BP68106 108 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 KRT76Q01546 638 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 KCNH2Q12809 1159 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 NOGQ13253 232 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 CTTNQ14247 550 aaKnown RBP14.91□□□□□ -0.02
LIMS1-205ENST00000410093 SUPT20HL1Q3ZLR7 823 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 NOL9Q5SY16 702 aaKnown RBP14.91□□□□□ -0.02
LIMS1-205ENST00000410093 PAPD7Q5XG87 772 aaKnown RBP14.91□□□□□ -0.02
LIMS1-205ENST00000410093 IQCEQ6IPM2 695 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 RGMBQ6NW40 437 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 SLC9A9Q8IVB4 645 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 MYCT1Q8N699 235 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 SYTL5Q8TDW5 730 aaPredicted RBP14.91□□□□□ -0.02
LIMS1-205ENST00000410093 EEF2KMTQ96G04 330 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 LXNQ9BS40 222 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 LARSQ9P2J5 1176 aaKnown RBP14.91□□□□□ -0.02
LIMS1-205ENST00000410093 DDX41Q9UJV9 622 aaKnown RBP14.91□□□□□ -0.02
LIMS1-205ENST00000410093 GUCA1BQ9UMX6 200 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 PHIPQ8WWQ0 1821 aa14.91□□□□□ -0.02
LIMS1-205ENST00000410093 LRRC53A6NM62 1247 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 TACC1O75410 805 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 ALAS1P13196 640 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 ITGB5P18084 799 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 MCM3P25205 808 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 ABCD1P33897 745 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 PSMC2P35998 433 aaKnown RBP14.9□□□□□ -0.02
LIMS1-205ENST00000410093 KIF11P52732 1056 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 MTMR1Q13613 665 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 BMS1Q14692 1282 aaKnown RBP14.9□□□□□ -0.02
LIMS1-205ENST00000410093 PPP2R5AQ15172 486 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 COL13A1Q5TAT6 717 aaPredicted RBP14.9□□□□□ -0.02
LIMS1-205ENST00000410093 ZNF720Q7Z2F6 126 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 FAM178BQ8IXR5 827 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 CCDC155Q8N6L0 562 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 SECISBP2LQ93073 1101 aaKnown RBP14.9□□□□□ -0.02
LIMS1-205ENST00000410093 VTI1AQ96AJ9 217 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 CDHR1Q96JP9 859 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 ALS2CR12Q96Q35 445 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 IFIH1Q9BYX4 1025 aaKnown RBP14.9□□□□□ -0.02
LIMS1-205ENST00000410093 RPAP3Q9H6T3 665 aaPredicted RBP14.9□□□□□ -0.02
LIMS1-205ENST00000410093 TMEM206Q9H813 350 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 ARHGAP20Q9P2F6 1191 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 KCNG1Q9UIX4 513 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 TSKSQ9UJT2 592 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 ADAMTS5Q9UNA0 930 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 PCDHA13Q9Y5I0 950 aa14.9□□□□□ -0.02
LIMS1-205ENST00000410093 CTAGE15A4D2H0 777 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 VWA5AO00534 786 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 AOC2O75106 756 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 CTAGE8P0CG41 777 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 QARSP47897 775 aaKnown RBP14.89□□□□□ -0.03
LIMS1-205ENST00000410093 AMPD2Q01433 879 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 RAD51AP2Q09MP3 1159 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 MTMR2Q13614 643 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 BRD3Q15059 726 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 FBXO38Q6PIJ6 1188 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 TMCO3Q6UWJ1 677 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 GBP6Q6ZN66 633 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms