RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PDGFCQ9NRA1 345 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 TAF1P21675 1872 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 BTBD19C9JJ37 291 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 CXCL11O14625 94 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 MXI1P50539 228 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 FKBP1AP62942 108 aaKnown RBP12.44□□□□□ -0.42
SNX13-202ENST00000409604 GLYCTKQ8IVS8 523 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 MB21D1Q8N884 522 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 TARS2Q9BW92 718 aaKnown RBP12.44□□□□□ -0.42
SNX13-202ENST00000409604 PRKAG2Q9UGJ0 569 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 GOLGA8SH3BPF8 625 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 TACC1O75410 805 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 NLRP11P59045 1033 aaKnown RBP12.43□□□□□ -0.42
SNX13-202ENST00000409604 LACTBP83111 547 aaPredicted RBP12.43□□□□□ -0.42
SNX13-202ENST00000409604 PGM5Q15124 567 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 HSP90B2PQ58FF3 399 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 SCYL2Q6P3W7 929 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 CATSPERGQ6ZRH7 1159 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 KCNK18Q7Z418 384 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 CEP57Q86XR8 500 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 PASD1Q8IV76 773 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 DHTKD1Q96HY7 919 aaPredicted RBP12.43□□□□□ -0.42
SNX13-202ENST00000409604 MRIQ9BWK5 157 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 NDST4Q9H3R1 872 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 SLC38A10Q9HBR0 1119 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 PIN4Q9Y237 131 aaKnown RBP12.43□□□□□ -0.42
SNX13-202ENST00000409604 TTLL3Q9Y4R7 772 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 PRRC2BQ5JSZ5 2229 aaKnown RBP12.43□□□□□ -0.42
SNX13-202ENST00000409604 ACTN4O43707 911 aaKnown RBP12.43□□□□□ -0.42
SNX13-202ENST00000409604 ZNF746Q6NUN9 644 aaPredicted RBP12.43□□□□□ -0.42
SNX13-202ENST00000409604 EFCAB12Q6NXP0 572 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
SNX13-202ENST00000409604 MAP3K14Q99558 947 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 ZBED2Q9BTP6 218 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 SETD4Q9NVD3 440 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 LRFN2Q9ULH4 789 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 PCDHB4Q9Y5E5 795 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 A0A087X0B3 334 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 MEIS2O14770 477 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 BCRP11274 1271 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 GAP43P17677 238 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 NT5C2P49902 561 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 EVCP57679 992 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 KRT83P78385 493 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 GLRA4Q5JXX5 417 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 MCPH1Q8NEM0 835 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 RGPD1P0DJD0 1748 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 ENC1O14682 589 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 SFNP31947 248 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 GRB10Q13322 594 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 NAA35Q5VZE5 725 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 IFIH1Q9BYX4 1025 aaKnown RBP12.43□□□□□ -0.42
SNX13-202ENST00000409604 KLK14Q9P0G3 267 aa12.43□□□□□ -0.42
SNX13-202ENST00000409604 PIK3R2O00459 728 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 GH1P01241 217 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 NEFHP12036 1026 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 ERCC5P28715 1186 aaPredicted RBP12.42□□□□□ -0.42
SNX13-202ENST00000409604 ARMCX2Q7L311 632 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 ACRBPQ8NEB7 543 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 MICAL1Q8TDZ2 1067 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 FAM149B1Q96BN6 582 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 ADAMTS1Q9UHI8 967 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 SOWAHDA6NJG2 315 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 AOC2O75106 756 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 EYA4O95677 639 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 CYP2C9P11712 490 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 SREBF1P36956 1147 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 CASP4P49662 377 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 PPP2R3BQ9Y5P8 575 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 ZNF233A6NK53 670 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 MKRN4PQ13434 485 aaPredicted RBP12.42□□□□□ -0.42
SNX13-202ENST00000409604 PAN2Q504Q3 1202 aaKnown RBP12.42□□□□□ -0.42
SNX13-202ENST00000409604 XKR3Q5GH77 459 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 CCDC102AQ96A19 550 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 FAM84AQ96KN4 292 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 GDAP1L1Q96MZ0 367 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 DNAI2Q9GZS0 605 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 BCCIPQ9P287 314 aaKnown RBP eCLIP12.42□□□□□ -0.428e-7■■■■□ 21.9
SNX13-202ENST00000409604 POLIQ9UNA4 740 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 AGTPBP1Q9UPW5 1226 aa12.42□□□□□ -0.42
SNX13-202ENST00000409604 ZEB2O60315 1214 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 AFPP02771 609 aaKnown RBP12.41□□□□□ -0.42
SNX13-202ENST00000409604 FCGRTP55899 365 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 KNOP1Q1ED39 458 aaKnown RBP12.41□□□□□ -0.42
SNX13-202ENST00000409604 KIAA1841Q6NSI8 718 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 CYP26C1Q6V0L0 522 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 APBB1IPQ7Z5R6 666 aaPredicted RBP12.41□□□□□ -0.42
SNX13-202ENST00000409604 ENOX1Q8TC92 643 aaKnown RBP12.41□□□□□ -0.42
SNX13-202ENST00000409604 CCSER1Q9C0I3 900 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 RPF1Q9H9Y2 349 aaKnown RBP12.41□□□□□ -0.42
SNX13-202ENST00000409604 RRAGDQ9NQL2 400 aaPredicted RBP12.41□□□□□ -0.42
SNX13-202ENST00000409604 GJB1P08034 283 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 PDIA5Q14554 519 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 KIAA0753Q2KHM9 967 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 TCP11X2Q5H9J9 407 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 CXCL17Q6UXB2 119 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 GLIS3Q8NEA6 775 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 KIFAP3Q92845 792 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 PFASO15067 1338 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 C5P01031 1676 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms