RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 TSNAXIP1Q2TAA8 658 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 PUS10Q3MIT2 529 aaKnown RBP17.83■□□□□ 0.44
CDK11B-204ENST00000407249 SLC9C1Q4G0N8 1177 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 ASPRV1Q53RT3 343 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 NAA35Q5VZE5 725 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 DYMQ7RTS9 669 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 CAPN7Q9Y6W3 813 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 GRID2IPA4D2P6 1211 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 PPP1R37O75864 691 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 FSBPO95073 299 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 GUCY2FP51841 1108 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 SFSWAPQ12872 951 aaKnown RBP17.83■□□□□ 0.44
CDK11B-204ENST00000407249 NAB2Q15742 525 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 SFMBT2Q5VUG0 894 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 YTHDF3Q7Z739 585 aaKnown RBP17.83■□□□□ 0.44
CDK11B-204ENST00000407249 CASKIN2Q8WXE0 1202 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 LARP4BQ92615 738 aaKnown RBP17.83■□□□□ 0.44
CDK11B-204ENST00000407249 SYN2Q92777 582 aaPredicted RBP17.83■□□□□ 0.44
CDK11B-204ENST00000407249 ZDHHC15Q96MV8 337 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 CPVLQ9H3G5 476 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 SERPINB13Q9UIV8 391 aa17.83■□□□□ 0.44
CDK11B-204ENST00000407249 GNA11P29992 359 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 TXKP42681 527 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 SLC8A3P57103 927 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 PICALMQ13492 652 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 TBCKQ8TEA7 893 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 WHAMMQ8TF30 809 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 INPP4AQ96PE3 977 aaPredicted RBP17.82■□□□□ 0.44
CDK11B-204ENST00000407249 PNMA5Q96PV4 448 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 KRT12Q99456 494 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 C6orf50Q9HD87 102 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 NLRC4Q9NPP4 1024 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 MTMR4Q9NYA4 1195 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 CEP72Q9P209 647 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 SEC63Q9UGP8 760 aaKnown RBP17.82■□□□□ 0.44
CDK11B-204ENST00000407249 SKAP2O75563 359 aaPredicted RBP17.82■□□□□ 0.44
CDK11B-204ENST00000407249 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
CDK11B-204ENST00000407249 FTCDO95954 541 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 ORC2Q13416 577 aaPredicted RBP17.82■□□□□ 0.44
CDK11B-204ENST00000407249 SUPT20HQ8NEM7 779 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 ATP6V1G3Q96LB4 118 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 TANGO6Q9C0B7 1094 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 PCDHGC5Q9Y5F6 944 aa17.82■□□□□ 0.44
CDK11B-204ENST00000407249 ESYT2A0FGR8 921 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 NOL4O94818 638 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 SERPING1P05155 500 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 KLRC1P26715 233 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 PEX19P40855 299 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 DNA2P51530 1060 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 EHHADHQ08426 723 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 TRADDQ15628 312 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 PTGISQ16647 500 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 FAM83BQ5T0W9 1011 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 MEI1Q5TIA1 1274 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 CDC42EP5Q6NZY7 148 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 FOXR2Q6PJQ5 311 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 FAM81AQ8TBF8 368 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 MTMR9Q96QG7 549 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 STK32BQ9NY57 414 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 RGL1Q9NZL6 768 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 F8W031 263 aaPredicted RBP17.81■□□□□ 0.44
CDK11B-204ENST00000407249 CRKP46108 304 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 SLC15A2Q16348 729 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 MSL1Q68DK7 614 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 MICALCLQ6ZW33 695 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 SNRNP27Q8WVK2 155 aaKnown RBP17.81■□□□□ 0.44
CDK11B-204ENST00000407249 CCDC17Q96LX7 622 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 CD248Q9HCU0 757 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 RIC8AQ9NPQ8 531 aa17.81■□□□□ 0.44
CDK11B-204ENST00000407249 LUC7LQ9NQ29 371 aaKnown RBP17.81■□□□□ 0.44
CDK11B-204ENST00000407249 HMGB1P1B2RPK0 211 aaPredicted RBP17.8■□□□□ 0.44
CDK11B-204ENST00000407249 MDH1P40925 334 aaKnown RBP17.8■□□□□ 0.44
CDK11B-204ENST00000407249 ITGB3BPQ13352 177 aaPredicted RBP17.8■□□□□ 0.44
CDK11B-204ENST00000407249 APOBEC3HQ6NTF7 200 aaKnown RBP17.8■□□□□ 0.44
CDK11B-204ENST00000407249 GLIS3Q8NEA6 775 aa17.8■□□□□ 0.44
CDK11B-204ENST00000407249 ZNF473Q8WTR7 871 aaKnown RBP17.8■□□□□ 0.44
CDK11B-204ENST00000407249 DHX36Q9H2U1 1008 aaKnown RBP17.8■□□□□ 0.44
CDK11B-204ENST00000407249 UNC45AQ9H3U1 944 aa17.8■□□□□ 0.44
CDK11B-204ENST00000407249 DDX4Q9NQI0 724 aaKnown RBP17.8■□□□□ 0.44
CDK11B-204ENST00000407249 GREB1LQ9C091 1923 aaPredicted RBP17.8■□□□□ 0.44
CDK11B-204ENST00000407249 ZNF646O15015 1829 aaPredicted RBP17.8■□□□□ 0.44
CDK11B-204ENST00000407249 MYO1FO00160 1098 aa17.8■□□□□ 0.44
CDK11B-204ENST00000407249 SNHG28P0DPA3 235 aa17.8■□□□□ 0.44
CDK11B-204ENST00000407249 LRRC41Q15345 812 aa17.8■□□□□ 0.44
CDK11B-204ENST00000407249 SPDL1Q96EA4 605 aa17.8■□□□□ 0.44
CDK11B-204ENST00000407249 CCT8L2Q96SF2 557 aa17.8■□□□□ 0.44
CDK11B-204ENST00000407249 TSG101Q99816 390 aa17.8■□□□□ 0.44
CDK11B-204ENST00000407249 MMADHCQ9H3L0 296 aaPredicted RBP17.8■□□□□ 0.44
CDK11B-204ENST00000407249 RIOX1Q9H6W3 641 aa17.8■□□□□ 0.44
CDK11B-204ENST00000407249 TESPA1A2RU30 521 aaPredicted RBP17.79■□□□□ 0.44
CDK11B-204ENST00000407249 TTLL1O95922 423 aa17.79■□□□□ 0.44
CDK11B-204ENST00000407249 HSPA9P38646 679 aaKnown RBP17.79■□□□□ 0.44
CDK11B-204ENST00000407249 FXR2P51116 673 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDK11B-204ENST00000407249 SLC18A3Q16572 532 aa17.79■□□□□ 0.44
CDK11B-204ENST00000407249 SOGA3Q5TF21 947 aa17.79■□□□□ 0.44
CDK11B-204ENST00000407249 MYCBPAPQ8TBZ2 947 aa17.79■□□□□ 0.44
CDK11B-204ENST00000407249 DDX12PQ92771 950 aa17.79■□□□□ 0.44
CDK11B-204ENST00000407249 CDK5RAP3Q96JB5 506 aa17.79■□□□□ 0.44
CDK11B-204ENST00000407249 PACSIN2Q9UNF0 486 aaPredicted RBP17.79■□□□□ 0.44
CDK11B-204ENST00000407249 RAD51CO43502 376 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms