RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 A0A1W2PRG0 241 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 IVLP07476 585 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 MCTP2Q6DN12 878 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 SYT2Q8N9I0 419 aaPredicted RBP12.99□□□□□ -0.33
PCNX4-204ENST00000406949 HOOK2Q96ED9 719 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 SHTN1A0MZ66 631 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 KRIT1O00522 736 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
PCNX4-204ENST00000406949 EPHB4P54760 987 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 SLC12A3P55017 1021 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 GOLGA5Q8TBA6 731 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 LMBR1Q8WVP7 490 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 TMEM39BQ9GZU3 492 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 PCNTO95613 3336 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 EP400Q96L91 3159 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 MYH10P35580 1976 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 EYA4O95677 639 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 EDRF1Q3B7T1 1238 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 UBLCP1Q8WVY7 318 aaPredicted RBP12.98□□□□□ -0.33
PCNX4-204ENST00000406949 CCDC127Q96BQ5 260 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 TLR10Q9BXR5 811 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 ZNF341Q9BYN7 854 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 EDEM3Q9BZQ6 932 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 DPH5Q9H2P9 285 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 ATF5Q9Y2D1 282 aaPredicted RBP12.98□□□□□ -0.33
PCNX4-204ENST00000406949 NAV1Q8NEY1 1877 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 COL22A1Q8NFW1 1626 aaPredicted RBP12.98□□□□□ -0.33
PCNX4-204ENST00000406949 TARSL2A2RTX5 802 aaKnown RBP12.98□□□□□ -0.33
PCNX4-204ENST00000406949 TESPA1A2RU30 521 aaPredicted RBP12.98□□□□□ -0.33
PCNX4-204ENST00000406949 EDIL3O43854 480 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 EIF2AK2P19525 551 aaKnown RBP12.98□□□□□ -0.33
PCNX4-204ENST00000406949 SREBF1P36956 1147 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 IFFO1Q0D2I5 559 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 COG2Q14746 738 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 GLYCTKQ8IVS8 523 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 RNF10Q8N5U6 811 aaKnown RBP12.98□□□□□ -0.33
PCNX4-204ENST00000406949 SERPINA10Q9UK55 444 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 MYO3BQ8WXR4 1341 aa12.98□□□□□ -0.33
PCNX4-204ENST00000406949 TLR2O60603 784 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 GAP43P17677 238 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 IBSPP21815 317 aaPredicted RBP12.97□□□□□ -0.33
PCNX4-204ENST00000406949 MYL7Q01449 175 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 SF3A3Q12874 501 aaKnown RBP eCLIP12.97□□□□□ -0.33
PCNX4-204ENST00000406949 KLHDC7AQ5VTJ3 777 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 RINT1Q6NUQ1 792 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 NACC1Q96RE7 527 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 LXNQ9BS40 222 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 PITPNM2Q9BZ72 1349 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 SMIM23A6NLE4 172 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 IPO5O00410 1097 aaKnown RBP12.97□□□□□ -0.33
PCNX4-204ENST00000406949 PDXKO00764 312 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 PRELPP51888 382 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 CEP55Q53EZ4 464 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 FRMD5Q7Z6J6 570 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 SUPT20HQ8NEM7 779 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 BICD1Q96G01 975 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 CTTNBP2NLQ9P2B4 639 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 DNAJC12Q9UKB3 198 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 STK24Q9Y6E0 443 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 PLIN4Q96Q06 1357 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 MYH1P12882 1939 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 GOLGA8IPA6NC78 632 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 GOLGA8JA6NMD2 632 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 CARSP49589 748 aaKnown RBP12.97□□□□□ -0.33
PCNX4-204ENST00000406949 GNGT1P63211 74 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 LDHDQ86WU2 507 aa12.97□□□□□ -0.33
PCNX4-204ENST00000406949 LAMB2P55268 1798 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 NRAPQ86VF7 1730 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 CCDC172P0C7W6 258 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 SPATA31C1P0DKV0 1188 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 PON1P27169 355 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 ZNF571Q7Z3V5 609 aaPredicted RBP12.96□□□□□ -0.33
PCNX4-204ENST00000406949 ETNPPLQ8TBG4 499 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 DDX47Q9H0S4 455 aaKnown RBP12.96□□□□□ -0.33
PCNX4-204ENST00000406949 KCTD10Q9H3F6 313 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 STK32BQ9NY57 414 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 BZW2Q9Y6E2 419 aaKnown RBP12.96□□□□□ -0.33
PCNX4-204ENST00000406949 TBX3O15119 743 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 NOL4O94818 638 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 ARP10275 920 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 SSR1P43307 286 aaKnown RBP12.96□□□□□ -0.33
PCNX4-204ENST00000406949 JAG1P78504 1218 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 PPFIA1Q13136 1202 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 DRAP1Q14919 205 aaPredicted RBP12.96□□□□□ -0.33
PCNX4-204ENST00000406949 NAB2Q15742 525 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 ZCWPW2Q504Y3 356 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 FAM102BQ5T8I3 360 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 AGBL1Q96MI9 1066 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 P2RX7Q99572 595 aaKnown RBP12.96□□□□□ -0.33
PCNX4-204ENST00000406949 IDI2Q9BXS1 227 aa12.96□□□□□ -0.33
PCNX4-204ENST00000406949 LARSQ9P2J5 1176 aaKnown RBP12.96□□□□□ -0.33
PCNX4-204ENST00000406949 ERLIN2O94905 339 aa12.96□□□□□ -0.34
PCNX4-204ENST00000406949 HNRNPH3P31942 346 aaKnown RBP12.96□□□□□ -0.34
PCNX4-204ENST00000406949 COBLL1Q53SF7 1204 aa12.96□□□□□ -0.34
PCNX4-204ENST00000406949 CEP85LQ5SZL2 805 aa12.96□□□□□ -0.34
PCNX4-204ENST00000406949 HGSNATQ68CP4 663 aa12.96□□□□□ -0.34
PCNX4-204ENST00000406949 NIM1KQ8IY84 436 aa12.96□□□□□ -0.34
PCNX4-204ENST00000406949 PPM1KQ8N3J5 372 aa12.96□□□□□ -0.34
PCNX4-204ENST00000406949 SH2D3CQ8N5H7 860 aa12.96□□□□□ -0.34
PCNX4-204ENST00000406949 GMCL1Q96IK5 515 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms