RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PSMD10O75832 226 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 HEXIM1O94992 359 aaKnown RBP10.79□□□□□ -0.68
MSH2-202ENST00000406134 AFPP02771 609 aaKnown RBP10.79□□□□□ -0.68
MSH2-202ENST00000406134 NR3C1P04150 777 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 HLA-DOAP06340 250 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 FKBP1AP62942 108 aaKnown RBP10.79□□□□□ -0.68
MSH2-202ENST00000406134 POU5F1Q01860 360 aaKnown RBP10.79□□□□□ -0.68
MSH2-202ENST00000406134 CYP4A11Q02928 519 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 CFAP221Q4G0U5 840 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 PROCA1Q8NCQ7 364 aaPredicted RBP10.79□□□□□ -0.68
MSH2-202ENST00000406134 OLFML3Q9NRN5 406 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 TSKSQ9UJT2 592 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 KIAA1217Q5T5P2 1943 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 SIP14410 1827 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 PPFIA4O75335 1185 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 ICA1Q05084 483 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 SLC15A2Q16348 729 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 RASGEF1CQ8N431 466 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 TPCN2Q8NHX9 752 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 KRT12Q99456 494 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 BHMT2Q9H2M3 363 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 EPB41L5Q9HCM4 733 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 TYW1Q9NV66 732 aaKnown RBP10.79□□□□□ -0.68
MSH2-202ENST00000406134 PI4KBQ9UBF8 816 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 LOC285556D6RIA3 1793 aa10.79□□□□□ -0.68
MSH2-202ENST00000406134 GOLGA6CA6NDK9 693 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 SFI1A8K8P3 1242 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 TRIM37O94972 964 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 KIF4AO95239 1232 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 GOLGA6DP0CG33 693 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 ECE1P42892 770 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 NFIL3Q16649 462 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 CBWD6Q4V339 395 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 ZC2HC1CQ53FD0 456 aaPredicted RBP10.78□□□□□ -0.68
MSH2-202ENST00000406134 CBWD3Q5JTY5 395 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 CBWD5Q5RIA9 395 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 SYDE2Q5VT97 1194 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 CD302Q8IX05 232 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 BANK1Q8NDB2 785 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 LMO3Q8TAP4 145 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 AMNQ9BXJ7 453 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 ACBD3Q9H3P7 528 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 GOLGA6AQ9NYA3 693 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.78□□□□□ -0.68
MSH2-202ENST00000406134 RNF14Q9UBS8 474 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 CLIC2O15247 247 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 SLC16A3O15427 465 aaKnown RBP10.78□□□□□ -0.68
MSH2-202ENST00000406134 IVLP07476 585 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 FLT3P36888 993 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 ZNF131P52739 623 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 GUCY2DQ02846 1103 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 PTPROQ16827 1216 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 TMEM179Q6ZVK1 233 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 PALB2Q86YC2 1186 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 DMAC2Q9NW81 257 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 YDJCA8MPS7 323 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 CETN3O15182 167 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 EIF3HO15372 352 aaKnown RBP eCLIP10.78□□□□□ -0.682e-8■■■■■ 41.3
MSH2-202ENST00000406134 LRRN2O75325 713 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 PPP1R37O75864 691 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 EYA4O95677 639 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 NMT1P30419 496 aaKnown RBP10.78□□□□□ -0.68
MSH2-202ENST00000406134 DNA2P51530 1060 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 CORO7P57737 925 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 MAPK7Q13164 816 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 ENOX2Q16206 610 aaKnown RBP10.78□□□□□ -0.68
MSH2-202ENST00000406134 LEKR1Q6ZMV7 388 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 DAW1Q8N136 415 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 METTL13Q8N6R0 699 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 ACTRT1Q8TDG2 376 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 PIGOQ8TEQ8 1089 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 SEC14L1Q92503 715 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 FAM20AQ96MK3 541 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 GLT8D2Q9H1C3 349 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 PRR12Q9ULL5 1215 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 NR2E1Q9Y466 385 aa10.78□□□□□ -0.68
MSH2-202ENST00000406134 ITGA4P13612 1032 aa10.77□□□□□ -0.68
MSH2-202ENST00000406134 RNASE9P60153 205 aaKnown RBP10.77□□□□□ -0.68
MSH2-202ENST00000406134 PPP2R5CQ13362 524 aa10.77□□□□□ -0.68
MSH2-202ENST00000406134 STRIP1Q5VSL9 837 aa10.77□□□□□ -0.68
MSH2-202ENST00000406134 ALS2CLQ60I27 953 aa10.77□□□□□ -0.68
MSH2-202ENST00000406134 TTC19Q6DKK2 380 aaPredicted RBP10.77□□□□□ -0.68
MSH2-202ENST00000406134 NT5DC3Q86UY8 548 aa10.77□□□□□ -0.68
MSH2-202ENST00000406134 FBXO11Q86XK2 927 aa10.77□□□□□ -0.68
MSH2-202ENST00000406134 C7orf43Q8WVR3 580 aa10.77□□□□□ -0.68
MSH2-202ENST00000406134 HES6Q96HZ4 224 aa10.77□□□□□ -0.68
MSH2-202ENST00000406134 ARMCX3Q9UH62 379 aaPredicted RBP10.77□□□□□ -0.68
MSH2-202ENST00000406134 CNTNAP1P78357 1384 aa10.77□□□□□ -0.68
MSH2-202ENST00000406134 GTPBP10A4D1E9 387 aaKnown RBP10.77□□□□□ -0.69
MSH2-202ENST00000406134 GOLGA8KD6RF30 607 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 ECE2O60344 883 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 CLSTN1O94985 981 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 HSPA9P38646 679 aaKnown RBP10.77□□□□□ -0.69
MSH2-202ENST00000406134 CTTNQ14247 550 aaKnown RBP10.77□□□□□ -0.69
MSH2-202ENST00000406134 EXOC3L4Q17RC7 722 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 PODNQ7Z5L7 613 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 FAM76AQ8TAV0 307 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 SLC5A5Q92911 643 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 NCANO14594 1321 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 F8VZ95 297 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms