RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 CCDC160A6NGH7 325 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 CIB2O75838 187 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 LAMC2Q13753 1193 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 DENND2CQ68D51 928 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 ZNF449Q6P9G9 518 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 SPATS2Q86XZ4 545 aaKnown RBP12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 SIX6OS1Q8N1H7 587 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 RAB17Q9H0T7 212 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 RAB20Q9NX57 234 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 BARHL2Q9NY43 387 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 CPSF3Q9UKF6 684 aaKnown RBP12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 NR2E3Q9Y5X4 410 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 KRIT1O00522 736 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 IKBKBO14920 756 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 CLDN3O15551 220 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 PLEKHA8P1O95397 391 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 SUPT20HL2P0C7V6 817 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 LIG3P49916 1009 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 PDIA6Q15084 440 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 HHATQ5VTY9 493 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 MAP1SQ66K74 1059 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 PCDHB4Q9Y5E5 795 aa12.72□□□□□ -0.37
RAPGEF3-204ENST00000405493 A0A087WWV3 80 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 CCDC151A5D8V7 595 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 GOLGA8KD6RF30 607 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 IPO5O00410 1097 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 NR2F2P24468 414 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 CACNB1Q02641 598 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 DEFB115Q30KQ5 88 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 PRAMEF18Q5VWM3 479 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 CAPS2Q9BXY5 557 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 GABBR1Q9UBS5 961 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 PCDHA5Q9Y5H7 936 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 PNMA6AP0CW24 399 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 HNRNPH2P55795 449 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 FKBP3Q00688 224 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 SF3A3Q12874 501 aaKnown RBP eCLIP12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 BAATQ14032 418 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 VEPH1Q14D04 833 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 SWSAP1Q6NVH7 229 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 RCOR1Q9UKL0 485 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 BZW2Q9Y6E2 419 aaKnown RBP12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 BUB1BO60566 1050 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 PPFIA4O75335 1185 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 CASP14P31944 242 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 NR5A1Q13285 461 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 FKBP1CQ5VVH2 108 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 POTEAQ6S8J7 498 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 CCDC110Q8TBZ0 833 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 HAUS4Q9H6D7 363 aa12.71□□□□□ -0.37
RAPGEF3-204ENST00000405493 NEDD4P46934 1319 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 HUS1O60921 280 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 NOGQ13253 232 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 CTTNQ14247 550 aaKnown RBP12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 DGKDQ16760 1214 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 DPCR1Q3MIW9 517 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 GNASQ5JWF2 1037 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 ZC3H15Q8WU90 426 aaKnown RBP12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 RSAD2Q8WXG1 361 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 TBC1D31Q96DN5 1066 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 KRT15P19012 456 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 EXOC3L4Q17RC7 722 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 CEP85LQ5SZL2 805 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 SCYL2Q6P3W7 929 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 SEL1LQ9UBV2 794 aa12.71□□□□□ -0.38
RAPGEF3-204ENST00000405493 A6NJR5 290 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 GGPS1O95749 300 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 SMARCA1P28370 1054 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 BFSP1Q12934 665 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 LRRC41Q15345 812 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 EPHA7Q15375 998 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 CEP55Q53EZ4 464 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 USP17L6PQ6QN14 398 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 ADAT2Q7Z6V5 191 aaKnown RBP12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 NCAPGQ9BPX3 1015 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 DDX23Q9BUQ8 820 aaKnown RBP12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 MAN1B1Q9UKM7 699 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 ASAP2O43150 1006 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 STAG3L1P0CL83 205 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 IL1R1P14778 569 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 BFSP2Q13515 415 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 MGARPQ8TDB4 240 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 STMN2Q93045 179 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 MRPL4Q9BYD3 311 aaKnown RBP12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 BHMT2Q9H2M3 363 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 POLIQ9UNA4 740 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 MEIS1O00470 390 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 BACE1P56817 501 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 ATP11AP98196 1134 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 SLFNL1Q499Z3 407 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 VPS52Q8N1B4 723 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 SOCS4Q8WXH5 440 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 TUBGCP2Q9BSJ2 902 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 EHD4Q9H223 541 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 PDS5AQ29RF7 1337 aaKnown RBP12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 F8W8V4 182 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 NR3C2P08235 984 aa12.7□□□□□ -0.38
RAPGEF3-204ENST00000405493 BSPRYQ5W0U4 402 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms