RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 TET1Q8NFU7 2136 aa20.13■□□□□ 0.81
THUMPD2-202ENST00000403537 FAM167AQ96KS9 214 aa20.13■□□□□ 0.81
THUMPD2-202ENST00000403537 INSL6Q9Y581 213 aa20.13■□□□□ 0.81
THUMPD2-202ENST00000403537 SMIM35A0A1B0GVV1 85 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 NEMFO60524 1076 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 GAS7O60861 476 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 CHRNA1P02708 482 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 SFNP31947 248 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 ANP32AP39687 249 aaKnown RBP20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 MRPS6P82932 125 aaKnown RBP20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 TAP1Q03518 808 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 SWSAP1Q6NVH7 229 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 CCDC60Q8IWA6 550 aaPredicted RBP20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 CKAP2LQ8IYA6 745 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 RDM1Q8NG50 284 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 DNAJB3Q8WWF6 145 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 BBXQ8WY36 941 aaPredicted RBP20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 NAP1L4Q99733 375 aaKnown RBP20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 NOL7Q9UMY1 257 aaKnown RBP20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 CEP131Q9UPN4 1083 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 SAMM50Q9Y512 469 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 COL6A3P12111 3177 aa20.12■□□□□ 0.81
THUMPD2-202ENST00000403537 KAT6AQ92794 2004 aa20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 CHMP2AO43633 222 aa20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 GTPBP6O43824 516 aaPredicted RBP20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 PSMD10O75832 226 aa20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 IGFBP4P22692 258 aa20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 JAK3P52333 1124 aa20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 MGAT3Q09327 533 aa20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 MKRN4PQ13434 485 aaPredicted RBP20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 LRCH2Q5VUJ6 765 aa20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 MYOCDQ8IZQ8 938 aa20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 TEKT3Q9BXF9 490 aa20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 FAM49AQ9H0Q0 323 aaPredicted RBP20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 UNC45AQ9H3U1 944 aa20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 ZDHHC9Q9Y397 364 aa20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 RBM19Q9Y4C8 960 aaKnown RBP20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 MAFBQ9Y5Q3 323 aaPredicted RBP20.11■□□□□ 0.81
THUMPD2-202ENST00000403537 TRAPPC10P48553 1259 aa20.1■□□□□ 0.81
THUMPD2-202ENST00000403537 CALCRLQ16602 461 aa20.1■□□□□ 0.81
THUMPD2-202ENST00000403537 TCTN1Q2MV58 587 aa20.1■□□□□ 0.81
THUMPD2-202ENST00000403537 MTHFD1LQ6UB35 978 aa20.1■□□□□ 0.81
THUMPD2-202ENST00000403537 TSHZ1Q6ZSZ6 1077 aa20.1■□□□□ 0.81
THUMPD2-202ENST00000403537 BRAPQ7Z569 592 aa20.1■□□□□ 0.81
THUMPD2-202ENST00000403537 ZNF710Q8N1W2 664 aa20.1■□□□□ 0.81
THUMPD2-202ENST00000403537 VAV3Q9UKW4 847 aa20.1■□□□□ 0.81
THUMPD2-202ENST00000403537 TRPV2Q9Y5S1 764 aa20.1■□□□□ 0.81
THUMPD2-202ENST00000403537 CDY2AQ9Y6F7 541 aa20.1■□□□□ 0.81
THUMPD2-202ENST00000403537 WDR81Q562E7 1941 aa20.1■□□□□ 0.81
THUMPD2-202ENST00000403537 CHD9Q3L8U1 2897 aa20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 ZSCAN22P10073 491 aaPredicted RBP20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 GHRP10912 638 aa20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 POU3F3P20264 500 aaPredicted RBP20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 KLRC1P26715 233 aa20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 LPIN1Q14693 890 aa20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 FBXO47Q5MNV8 452 aa20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 ODR4Q5SWX8 454 aa20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 C4orf32Q8N8J7 132 aa20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 TOP1MTQ969P6 601 aa20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 MTMR9Q96QG7 549 aa20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 FTHL17Q9BXU8 183 aa20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 TSPYL2Q9H2G4 693 aaPredicted RBP20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 DISC1Q9NRI5 854 aa20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 NRBP2Q9NSY0 501 aa20.09■□□□□ 0.81
THUMPD2-202ENST00000403537 KDM3AQ9Y4C1 1321 aa20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 MAGEB2O15479 319 aa20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 DDIT3P35638 169 aa20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 HTRA4P83105 476 aaPredicted RBP20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 ADGRE1Q14246 886 aa20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 FOXD4L6Q3SYB3 417 aaPredicted RBP20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 RILPL1Q5EBL4 403 aa20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 B3GNT9Q6UX72 402 aa20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 FOXD4L3Q6VB84 417 aaPredicted RBP20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 ARNTL2Q8WYA1 636 aa20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 SAMD11Q96NU1 681 aa20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 TGS1Q96RS0 853 aaKnown RBP20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 CELF4Q9BZC1 486 aaKnown RBP20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 GABBR1Q9UBS5 961 aa20.08■□□□□ 0.81
THUMPD2-202ENST00000403537 IGSF9BQ9UPX0 1349 aa20.07■□□□□ 0.8
THUMPD2-202ENST00000403537 EML1O00423 815 aa20.07■□□□□ 0.8
THUMPD2-202ENST00000403537 TBX3O15119 743 aa20.07■□□□□ 0.8
THUMPD2-202ENST00000403537 F13A1P00488 732 aa20.07■□□□□ 0.8
THUMPD2-202ENST00000403537 TXKP42681 527 aa20.07■□□□□ 0.8
THUMPD2-202ENST00000403537 SPIRE1Q08AE8 756 aa20.07■□□□□ 0.8
THUMPD2-202ENST00000403537 TRAPPC12Q8WVT3 735 aa20.07■□□□□ 0.8
THUMPD2-202ENST00000403537 CHAMP1Q96JM3 812 aa20.07■□□□□ 0.8
THUMPD2-202ENST00000403537 FAM20AQ96MK3 541 aa20.07■□□□□ 0.8
THUMPD2-202ENST00000403537 YME1L1Q96TA2 773 aa20.07■□□□□ 0.8
THUMPD2-202ENST00000403537 RNF216Q9NWF9 866 aaPredicted RBP20.07■□□□□ 0.8
THUMPD2-202ENST00000403537 OR52Z1P0C646 297 aa20.06■□□□□ 0.8
THUMPD2-202ENST00000403537 ERVK-21P61565 698 aa20.06■□□□□ 0.8
THUMPD2-202ENST00000403537 PTGDRQ13258 359 aa20.06■□□□□ 0.8
THUMPD2-202ENST00000403537 UGCGQ16739 394 aa20.06■□□□□ 0.8
THUMPD2-202ENST00000403537 FAM117BQ6P1L5 589 aa20.06■□□□□ 0.8
THUMPD2-202ENST00000403537 SP7Q8TDD2 431 aaPredicted RBP20.06■□□□□ 0.8
THUMPD2-202ENST00000403537 GBF1Q92538 1859 aa20.06■□□□□ 0.8
THUMPD2-202ENST00000403537 LMCD1Q9NZU5 365 aa20.06■□□□□ 0.8
THUMPD2-202ENST00000403537 CLIC4Q9Y696 253 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms