RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 RAB21Q9UL25 225 aa17.28■□□□□ 0.36
CDC42-203ENST00000400259 DICER1Q9UPY3 1922 aaKnown RBP17.28■□□□□ 0.36
CDC42-203ENST00000400259 ASTN2O75129 1339 aaPredicted RBP17.28■□□□□ 0.36
CDC42-203ENST00000400259 FLOT1O75955 427 aa17.28■□□□□ 0.36
CDC42-203ENST00000400259 PNMA6AP0CW24 399 aaPredicted RBP17.28■□□□□ 0.36
CDC42-203ENST00000400259 KCNA1Q09470 495 aa17.28■□□□□ 0.36
CDC42-203ENST00000400259 MTMR2Q13614 643 aa17.28■□□□□ 0.36
CDC42-203ENST00000400259 MUM1L1Q5H9M0 696 aa17.28■□□□□ 0.36
CDC42-203ENST00000400259 ZNF720Q7Z2F6 126 aa17.28■□□□□ 0.36
CDC42-203ENST00000400259 BBXQ8WY36 941 aaPredicted RBP17.28■□□□□ 0.36
CDC42-203ENST00000400259 RAVER2Q9HCJ3 691 aaKnown RBP17.28■□□□□ 0.36
CDC42-203ENST00000400259 FBXL5Q9UKA1 691 aa17.28■□□□□ 0.36
CDC42-203ENST00000400259 CD2APQ9Y5K6 639 aa17.28■□□□□ 0.36
CDC42-203ENST00000400259 LOC285556D6RIA3 1793 aa17.27■□□□□ 0.36
CDC42-203ENST00000400259 GTPBP10A4D1E9 387 aaKnown RBP17.27■□□□□ 0.36
CDC42-203ENST00000400259 SFI1A8K8P3 1242 aa17.27■□□□□ 0.36
CDC42-203ENST00000400259 ENC1O14682 589 aa17.27■□□□□ 0.36
CDC42-203ENST00000400259 P4HBP07237 508 aaKnown RBP17.27■□□□□ 0.36
CDC42-203ENST00000400259 NMT1P30419 496 aaKnown RBP17.27■□□□□ 0.36
CDC42-203ENST00000400259 MRPS9P82933 396 aaKnown RBP17.27■□□□□ 0.36
CDC42-203ENST00000400259 DMTNQ08495 405 aa17.27■□□□□ 0.36
CDC42-203ENST00000400259 MIER3Q7Z3K6 550 aa17.27■□□□□ 0.36
CDC42-203ENST00000400259 CPXCR1Q8N123 301 aa17.27■□□□□ 0.36
CDC42-203ENST00000400259 SLC35C1Q96A29 364 aa17.27■□□□□ 0.36
CDC42-203ENST00000400259 STRA6Q9BX79 667 aa17.27■□□□□ 0.36
CDC42-203ENST00000400259 DBR1Q9UK59 544 aaKnown RBP17.27■□□□□ 0.36
CDC42-203ENST00000400259 KIAA1217Q5T5P2 1943 aa17.27■□□□□ 0.36
CDC42-203ENST00000400259 MACROD2A1Z1Q3 448 aa17.27■□□□□ 0.35
CDC42-203ENST00000400259 TACC1O75410 805 aa17.27■□□□□ 0.35
CDC42-203ENST00000400259 LYPLA2O95372 231 aa17.27■□□□□ 0.35
CDC42-203ENST00000400259 MAGEA1P43355 309 aa17.27■□□□□ 0.35
CDC42-203ENST00000400259 MAPK7Q13164 816 aa17.27■□□□□ 0.35
CDC42-203ENST00000400259 ITGB3BPQ13352 177 aaPredicted RBP17.27■□□□□ 0.35
CDC42-203ENST00000400259 TBC1D10BQ4KMP7 808 aaPredicted RBP17.27■□□□□ 0.35
CDC42-203ENST00000400259 NBPF12Q5TAG4 269 aaPredicted RBP17.27■□□□□ 0.35
CDC42-203ENST00000400259 CCDC125Q86Z20 511 aa17.27■□□□□ 0.35
CDC42-203ENST00000400259 FAM178BQ8IXR5 827 aa17.27■□□□□ 0.35
CDC42-203ENST00000400259 SCYL3Q8IZE3 742 aa17.27■□□□□ 0.35
CDC42-203ENST00000400259 RPGRIP1Q96KN7 1286 aa17.27■□□□□ 0.35
CDC42-203ENST00000400259 RPAP3Q9H6T3 665 aaPredicted RBP17.27■□□□□ 0.35
CDC42-203ENST00000400259 HDAC6Q9UBN7 1215 aa17.27■□□□□ 0.35
CDC42-203ENST00000400259 JRKLQ9Y4A0 524 aa17.27■□□□□ 0.35
CDC42-203ENST00000400259 ARHGEF35A5YM69 484 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 ZBED4O75132 1171 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 PPP1R37O75864 691 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 TUBBP07437 444 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 CASP4P49662 377 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 DGKZQ13574 1117 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 TDRD12Q587J7 1177 aaKnown RBP17.26■□□□□ 0.35
CDC42-203ENST00000400259 BANK1Q8NDB2 785 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 HNRNPLLQ8WVV9 542 aaKnown RBP17.26■□□□□ 0.35
CDC42-203ENST00000400259 POLD4Q9HCU8 107 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 TBC1D22BQ9NU19 505 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 PRLRP16471 622 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 PON1P27169 355 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 RPS6P62753 249 aaKnown RBP17.26■□□□□ 0.35
CDC42-203ENST00000400259 GFPT1Q06210 699 aaPredicted RBP17.26■□□□□ 0.35
CDC42-203ENST00000400259 CKAP4Q07065 602 aaKnown RBP17.26■□□□□ 0.35
CDC42-203ENST00000400259 PGM5Q15124 567 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 EXOC3L4Q17RC7 722 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 KLHDC7AQ5VTJ3 777 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 RNF10Q8N5U6 811 aaKnown RBP17.26■□□□□ 0.35
CDC42-203ENST00000400259 ARFGAP3Q9NP61 516 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 DMAC2Q9NW81 257 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 PCDHB13Q9Y5F0 798 aa17.26■□□□□ 0.35
CDC42-203ENST00000400259 VWA5AO00534 786 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 MAPTP10636 758 aaKnown RBP17.25■□□□□ 0.35
CDC42-203ENST00000400259 PSMC2P35998 433 aaKnown RBP17.25■□□□□ 0.35
CDC42-203ENST00000400259 BACE1P56817 501 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 APBA1Q02410 837 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 MTMR1Q13613 665 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 ZC2HC1CQ53FD0 456 aaPredicted RBP17.25■□□□□ 0.35
CDC42-203ENST00000400259 DAW1Q8N136 415 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 GOLGA5Q8TBA6 731 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 C12orf42Q96LP6 360 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 TAAR1Q96RJ0 339 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 SGIP1Q9BQI5 828 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 AS3MTQ9HBK9 375 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 LUC7LQ9NQ29 371 aaKnown RBP17.25■□□□□ 0.35
CDC42-203ENST00000400259 BCS1LQ9Y276 419 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 CAPN6Q9Y6Q1 641 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 WDR90Q96KV7 1748 aa17.25■□□□□ 0.35
CDC42-203ENST00000400259 CLIC2O15247 247 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 UCHL3P15374 230 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 RASSF7Q02833 373 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 RAPGEF1Q13905 1077 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 MYBPC2Q14324 1141 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 ASIC2Q16515 512 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 SLC18A3Q16572 532 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 ODR4Q5SWX8 454 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 GBP6Q6ZN66 633 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 SLC9A9Q8IVB4 645 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 TMEM174Q8WUU8 243 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 ARID2Q68CP9 1835 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 DDX39AO00148 427 aaKnown RBP17.24■□□□□ 0.35
CDC42-203ENST00000400259 HIP1RO75146 1068 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 SLC9A1P19634 815 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 SPP2Q13103 211 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 ALCAMQ13740 583 aa17.24■□□□□ 0.35
CDC42-203ENST00000400259 XRRA1Q6P2D8 792 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms