RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 FOXN1O15353 648 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 TRPA1O75762 1119 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 MARK3P27448 753 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 NKX1-1Q15270 411 aaPredicted RBP16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 FAM47EQ6ZV65 393 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 PITPNM3Q9BZ71 974 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 SAYSD1Q9NPB0 183 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 PODXLO00592 558 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 ZBTB5O15062 677 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 ZRANB2O95218 330 aaKnown RBP eCLIP16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 THOC5Q13769 683 aaKnown RBP16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 HDAC6Q9UBN7 1215 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 GOLGA8CPA6NN73 597 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 HDLBPQ00341 1268 aaKnown RBP16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 MYO1EQ12965 1108 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 NFRKBQ6P4R8 1299 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 TMEM179Q6ZVK1 233 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 ABI1Q8IZP0 508 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 BPIFA3Q9BQP9 254 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 HAUS8Q9BT25 410 aa16.33■□□□□ 0.2
UBXN2B-201ENST00000399598 ANKARQ7Z5J8 1434 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 NCK2O43639 380 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 PSMA2P25787 234 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 AP3B2Q13367 1082 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 IQCB1Q15051 598 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 PPP6R3Q5H9R7 873 aaPredicted RBP16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 RPAINQ86UA6 219 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 SIX6OS1Q8N1H7 587 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 SAMD9Q5K651 1589 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 POTEB3A0JP26 581 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 FAM196BA6NMK8 535 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 POTECB2RU33 542 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 MYO1CO00159 1063 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 S100BP04271 92 aaPredicted RBP16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 POTEBQ6S5H4 581 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 DCP1AQ9NPI6 582 aaPredicted RBP16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 MIF4GDA9UHW6 222 aaKnown RBP16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 GPR162Q16538 588 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 PROM2Q8N271 834 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 HSPH1Q92598 858 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 ZNF341Q9BYN7 854 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 COA1Q9GZY4 146 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 PPME1Q9Y570 386 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 SCINQ9Y6U3 715 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 ABCD1P33897 745 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 ZNF211Q13398 564 aaPredicted RBP16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 SUPT20HL1Q3ZLR7 823 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 TTC17Q96AE7 1141 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 NUDCD1Q96RS6 583 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 MXD3Q9BW11 206 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 TSPYL2Q9H2G4 693 aaPredicted RBP16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 QTRT2Q9H974 415 aaKnown RBP16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 RPF1Q9H9Y2 349 aaKnown RBP16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 TMEM260Q9NX78 707 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 MINPP1Q9UNW1 487 aa16.32■□□□□ 0.2
UBXN2B-201ENST00000399598 CEP170Q5SW79 1584 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 A0A0G2JND7 137 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 PVALEFA0A1B0GWK0 134 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 TBC1D9BQ66K14 1250 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 SHC4Q6S5L8 630 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 XXYLT1Q8NBI6 393 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 DDX47Q9H0S4 455 aaKnown RBP16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 MRPL46Q9H2W6 279 aaKnown RBP16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 PASD1Q8IV76 773 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 DACT3Q96B18 629 aaPredicted RBP16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 IQANK1A0A1B0GTG1 560 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 GNGT2O14610 69 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 SKIP12755 728 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 COASYQ13057 564 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 DEPDC1BQ8WUY9 529 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 RAD54LQ92698 747 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 BEGAINQ9BUH8 593 aa16.31■□□□□ 0.2
UBXN2B-201ENST00000399598 MAPK13O15264 365 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 KIF22Q14807 665 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 METTL23Q86XA0 190 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 HIPK4Q8NE63 616 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 CXorf38Q8TB03 319 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 CEP95Q96GE4 821 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 MLXIPLQ9NP71 852 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 SYNGAP1Q96PV0 1343 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 ANKRD20A4Q4UJ75 823 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 ANKRD20A8PQ5CZ79 823 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 ANKRD20A2Q5SQ80 823 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 ANKRD20A1Q5TYW2 823 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 BANK1Q8NDB2 785 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 FGD4Q96M96 766 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 OSBPL9Q96SU4 736 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 EFHD1Q9BUP0 239 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 CPSF3Q9UKF6 684 aaKnown RBP16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 RASA4BC9J798 803 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 USP17L10C9JJH3 530 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 IPO5O00410 1097 aaKnown RBP16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 RASA4O43374 803 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 TJP3O95049 919 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 MAGOHP61326 146 aaKnown RBP16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 AP1ARQ63HQ0 302 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 SLFN12LQ6IEE8 588 aa16.3■□□□□ 0.2
UBXN2B-201ENST00000399598 CLEC4GQ6UXB4 293 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms