RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ZKSCAN3Q9BRR0 538 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 RNF39Q9H2S5 420 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 VPS45Q9NRW7 570 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 ARGLU1Q9NWB6 273 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 RGS17Q9UGC6 210 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 KDM3BQ7LBC6 1761 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 C17orf113A0A1B0GUU1 675 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 PTPDC1A2A3K4 754 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 HSPD1P10809 573 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 GZMAP12544 262 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 ATP5JP18859 108 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 ID4P47928 161 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 DHCR24Q15392 516 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 SLC44A2Q8IWA5 706 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 SLFN12Q8IYM2 578 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 EDEM1Q92611 657 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 CENPIQ92674 756 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 TEKT1Q969V4 418 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 ZBTB9Q96C00 473 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 PGBD1Q96JS3 809 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 SLC4A9Q96Q91 983 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 TTLL2Q9BWV7 592 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 NIFKQ9BYG3 293 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 CNNM1Q9NRU3 951 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 PAPPAQ13219 1627 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 PXDNLA1KZ92 1463 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 TISP43B9A030 160 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 B9A039 149 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 DKC1O60832 514 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 L1CAMP32004 1257 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 KRT85P78386 507 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 PSMD6Q15008 389 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 LONRF2Q1L5Z9 754 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 RABL6Q3YEC7 729 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 ANO6Q4KMQ2 910 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 SETMARQ53H47 684 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 ZBTB38Q8NAP3 1195 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 BRSK1Q8TDC3 778 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 PIBF1Q8WXW3 757 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 EXOC2Q96KP1 924 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 TRPV4Q9HBA0 871 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 CRTAC1Q9NQ79 661 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 SEC31BQ9NQW1 1179 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 ZNF358Q9NW07 568 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 IRAK4Q9NWZ3 460 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 SUCOQ9UBS9 1254 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 PYCARDQ9ULZ3 195 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 GPR34Q9UPC5 381 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 EPN1Q9Y6I3 576 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 USP42Q9H9J4 1324 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 MED23Q9ULK4 1368 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 DOT1LQ8TEK3 1739 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 H3BRJ5 948 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 IPO7O95373 1038 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 CTDNEP1O95476 244 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 MT-ND3P03897 115 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 PTGS1P23219 599 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 PSMA5P28066 241 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 PDE4BQ07343 736 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 TERF2Q15554 542 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 PDCD2Q16342 344 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 ASIC2Q16515 512 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 NXPE4Q6UWF7 544 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 KBTBD3Q8NAB2 608 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 C7orf25Q9BPX7 421 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 TNMDQ9H2S6 317 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 KCTD10Q9H3F6 313 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 MAP10Q9P2G4 905 aa6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 IFT80Q9P2H3 777 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 TRMT112Q9UI30 125 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-202ENST00000399438 UQCRHLA0A096LP55 91 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 A0A1W2PRU2 124 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 E7EWF7 191 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 UQCRHP07919 91 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 SLC10A3P09131 477 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 GRIK1P39086 918 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 PHKA1P46020 1223 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 LRRC74AQ0VAA2 488 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 INAVAQ3KP66 663 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 FAM205BPQ63HN1 556 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 CHADLQ6NUI6 762 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 C6orf15Q6UXA7 325 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 MAP4K3Q8IVH8 894 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 PHKBQ93100 1093 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 PLD4Q96BZ4 506 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 USP28Q96RU2 1077 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 GPATCH1Q9BRR8 931 aaKnown RBP6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 SPATA9Q9BWV2 254 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 NUP62CLQ9H1M0 184 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 STARD7Q9NQZ5 370 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 PLSCR4Q9NRQ2 329 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 C6orf203Q9P0P8 240 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 MTRRQ9UBK8 725 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 ZNF232Q9UNY5 417 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 ZKSCAN5Q9Y2L8 839 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 C2CD2Q9Y426 696 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 SQORQ9Y6N5 450 aa6.87□□□□□ -1.31
TRAPPC13-202ENST00000399438 BRWD3Q6RI45 1802 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms