RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 UBE4BO95155 1302 aa16.8■□□□□ 0.28
MBD1-209ENST00000398495 EFCAB8A8MWE9 144 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 KIF11P52732 1056 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 POLR2FP61218 127 aaKnown RBP16.79■□□□□ 0.28
MBD1-209ENST00000398495 ODR4Q5SWX8 454 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 PADI6Q6TGC4 694 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 ZNF720Q7Z2F6 126 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 FAM178BQ8IXR5 827 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 TBC1D22BQ9NU19 505 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 LCTP09848 1927 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 TESPA1A2RU30 521 aaPredicted RBP16.79■□□□□ 0.28
MBD1-209ENST00000398495 IPO7O95373 1038 aaKnown RBP16.79■□□□□ 0.28
MBD1-209ENST00000398495 CCNE2O96020 404 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 AFPP02771 609 aaKnown RBP16.79■□□□□ 0.28
MBD1-209ENST00000398495 CATSPERGQ6ZRH7 1159 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.79■□□□□ 0.28
MBD1-209ENST00000398495 UBXN4Q92575 508 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 TMOD4Q9NZQ9 345 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 CDC23Q9UJX2 597 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 AFG3L2Q9Y4W6 797 aa16.79■□□□□ 0.28
MBD1-209ENST00000398495 TMEM150BA6NC51 233 aa16.78■□□□□ 0.28
MBD1-209ENST00000398495 TLR2O60603 784 aa16.78■□□□□ 0.28
MBD1-209ENST00000398495 TFRCP02786 760 aaKnown RBP16.78■□□□□ 0.28
MBD1-209ENST00000398495 EPB41P11171 864 aaKnown RBP16.78■□□□□ 0.28
MBD1-209ENST00000398495 ACTN1P12814 892 aa16.78■□□□□ 0.28
MBD1-209ENST00000398495 RPL13P26373 211 aaKnown RBP16.78■□□□□ 0.28
MBD1-209ENST00000398495 CCND2P30279 289 aa16.78■□□□□ 0.28
MBD1-209ENST00000398495 QARSP47897 775 aaKnown RBP16.78■□□□□ 0.28
MBD1-209ENST00000398495 VAV2P52735 878 aa16.78■□□□□ 0.28
MBD1-209ENST00000398495 OAZ1P54368 228 aa16.78■□□□□ 0.28
MBD1-209ENST00000398495 DCAF17Q5H9S7 520 aaPredicted RBP16.78■□□□□ 0.28
MBD1-209ENST00000398495 HGSNATQ68CP4 663 aa16.78■□□□□ 0.28
MBD1-209ENST00000398495 DPY19L2P1Q6NXN4 242 aa16.78■□□□□ 0.28
MBD1-209ENST00000398495 MAEAQ7L5Y9 396 aa16.78■□□□□ 0.28
MBD1-209ENST00000398495 DBR1Q9UK59 544 aaKnown RBP16.78■□□□□ 0.28
MBD1-209ENST00000398495 TEX35Q5T0J7 233 aa16.78■□□□□ 0.28
MBD1-209ENST00000398495 RSRC2Q7L4I2 434 aaKnown RBP16.78■□□□□ 0.28
MBD1-209ENST00000398495 CCDC94Q9BW85 323 aaPredicted RBP16.78■□□□□ 0.28
MBD1-209ENST00000398495 DUSP10Q9Y6W6 482 aa16.78■□□□□ 0.28
MBD1-209ENST00000398495 PTPRFP10586 1907 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 KRT86O43790 486 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 USP2O75604 605 aaPredicted RBP16.77■□□□□ 0.28
MBD1-209ENST00000398495 DDNO94850 711 aaPredicted RBP16.77■□□□□ 0.28
MBD1-209ENST00000398495 LYPLA2O95372 231 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 LCA5LO95447 670 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 RARRES1P49788 294 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 AMPD2Q01433 879 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 SPA17Q15506 151 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 NFIL3Q16649 462 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 SUPT20HL1Q3ZLR7 823 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 SFMBT2Q5VUG0 894 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 UPF1Q92900 1129 aaKnown RBP eCLIP16.77■□□□□ 0.28
MBD1-209ENST00000398495 SLC35C1Q96A29 364 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 SH2D3AQ9BRG2 576 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 STRA6Q9BX79 667 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 EPC1Q9H2F5 836 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 DEF6Q9H4E7 631 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 PCDHB13Q9Y5F0 798 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 PCDHA13Q9Y5I0 950 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 SNCAIPQ9Y6H5 919 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 KIAA1217Q5T5P2 1943 aa16.77■□□□□ 0.28
MBD1-209ENST00000398495 DOCK5Q9H7D0 1870 aa16.77■□□□□ 0.27
MBD1-209ENST00000398495 SPDYE16A6NNV3 312 aaPredicted RBP16.77■□□□□ 0.27
MBD1-209ENST00000398495 BACH1O14867 736 aa16.77■□□□□ 0.27
MBD1-209ENST00000398495 USO1O60763 962 aaKnown RBP16.77■□□□□ 0.27
MBD1-209ENST00000398495 PPP1R37O75864 691 aa16.77■□□□□ 0.27
MBD1-209ENST00000398495 NR3C2P08235 984 aa16.77■□□□□ 0.27
MBD1-209ENST00000398495 XRCC5P13010 732 aaKnown RBP16.77■□□□□ 0.27
MBD1-209ENST00000398495 H2AFXP16104 143 aaPredicted RBP16.77■□□□□ 0.27
MBD1-209ENST00000398495 SLC9A1P19634 815 aa16.77■□□□□ 0.27
MBD1-209ENST00000398495 MAPK8IP2Q13387 824 aaPredicted RBP16.77■□□□□ 0.27
MBD1-209ENST00000398495 ASTE1Q2TB18 679 aaPredicted RBP16.77■□□□□ 0.27
MBD1-209ENST00000398495 TCERG1LQ5VWI1 586 aa16.77■□□□□ 0.27
MBD1-209ENST00000398495 VSIG10LQ86VR7 867 aa16.77■□□□□ 0.27
MBD1-209ENST00000398495 BORCS6Q96GS4 357 aa16.77■□□□□ 0.27
MBD1-209ENST00000398495 IFIH1Q9BYX4 1025 aaKnown RBP16.77■□□□□ 0.27
MBD1-209ENST00000398495 METTL14Q9HCE5 456 aaKnown RBP16.77■□□□□ 0.27
MBD1-209ENST00000398495 AGPAT3Q9NRZ7 376 aa16.77■□□□□ 0.27
MBD1-209ENST00000398495 PUF60Q9UHX1 559 aaKnown RBP16.77■□□□□ 0.27
MBD1-209ENST00000398495 K7ENM7 598 aa16.76■□□□□ 0.27
MBD1-209ENST00000398495 AKR1B10O60218 316 aa16.76■□□□□ 0.27
MBD1-209ENST00000398495 JAK3P52333 1124 aa16.76■□□□□ 0.27
MBD1-209ENST00000398495 RAPGEF1Q13905 1077 aa16.76■□□□□ 0.27
MBD1-209ENST00000398495 VGLL4Q14135 290 aa16.76■□□□□ 0.27
MBD1-209ENST00000398495 PLS1Q14651 629 aa16.76■□□□□ 0.27
MBD1-209ENST00000398495 XRRA1Q6P2D8 792 aa16.76■□□□□ 0.27
MBD1-209ENST00000398495 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.76■□□□□ 0.27
MBD1-209ENST00000398495 STXBP4Q6ZWJ1 553 aa16.76■□□□□ 0.27
MBD1-209ENST00000398495 FAM186BQ8IYM0 893 aa16.76■□□□□ 0.27
MBD1-209ENST00000398495 SYN2Q92777 582 aaPredicted RBP16.76■□□□□ 0.27
MBD1-209ENST00000398495 WDR64B1ANS9 1081 aa16.75■□□□□ 0.27
MBD1-209ENST00000398495 ADM5C9JUS6 153 aa16.75■□□□□ 0.27
MBD1-209ENST00000398495 ATP2A1O14983 1001 aa16.75■□□□□ 0.27
MBD1-209ENST00000398495 YWHABP31946 246 aaKnown RBP16.75■□□□□ 0.27
MBD1-209ENST00000398495 CYP2J2P51589 502 aa16.75■□□□□ 0.27
MBD1-209ENST00000398495 TDRD12Q587J7 1177 aaKnown RBP16.75■□□□□ 0.27
MBD1-209ENST00000398495 SRGAP1Q7Z6B7 1085 aa16.75■□□□□ 0.27
MBD1-209ENST00000398495 GOLGA1Q92805 767 aa16.75■□□□□ 0.27
MBD1-209ENST00000398495 TEX13BQ9BXU2 312 aa16.75■□□□□ 0.27
MBD1-209ENST00000398495 NUCKS1Q9H1E3 243 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms