RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 PTGISQ16647 500 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 CEP85LQ5SZL2 805 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 LRIG3Q6UXM1 1119 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 ZFPM1Q8IX07 1006 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 NGLY1Q96IV0 654 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 PAGR1Q9BTK6 254 aa17.16■□□□□ 0.34
HOXA3-202ENST00000396352 SLC16A3O15427 465 aaKnown RBP17.15■□□□□ 0.34
HOXA3-202ENST00000396352 SART1O43290 800 aaKnown RBP17.15■□□□□ 0.34
HOXA3-202ENST00000396352 HLTFQ14527 1009 aaKnown RBP eCLIP17.15■□□□□ 0.34
HOXA3-202ENST00000396352 NAA35Q5VZE5 725 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 APOBEC3HQ6NTF7 200 aaKnown RBP17.15■□□□□ 0.34
HOXA3-202ENST00000396352 GJB7Q6PEY0 223 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 MAATS1Q7Z4T9 603 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 RASGEF1CQ8N431 466 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 PROCA1Q8NCQ7 364 aaPredicted RBP17.15■□□□□ 0.34
HOXA3-202ENST00000396352 DDX3XO00571 662 aaKnown RBP eCLIP17.15■□□□□ 0.34
HOXA3-202ENST00000396352 HLA-DOAP06340 250 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 EEF2P13639 858 aaKnown RBP17.15■□□□□ 0.34
HOXA3-202ENST00000396352 MDH1P40925 334 aaKnown RBP17.15■□□□□ 0.34
HOXA3-202ENST00000396352 KCNA1Q09470 495 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 B4GALNT4Q76KP1 1039 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 ERMNQ8TAM6 284 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 DCAF4Q8WV16 495 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 MKL1Q969V6 931 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 RUSC1Q9BVN2 902 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 GCNT4Q9P109 453 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 NRXN2Q9P2S2 1712 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 A0A0A6YYK5 440 aaPredicted RBP17.15■□□□□ 0.34
HOXA3-202ENST00000396352 ICE2Q659A1 982 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 BORCS6Q96GS4 357 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 DDX47Q9H0S4 455 aaKnown RBP17.15■□□□□ 0.34
HOXA3-202ENST00000396352 VAV3Q9UKW4 847 aa17.15■□□□□ 0.34
HOXA3-202ENST00000396352 RAD21O60216 631 aa17.14■□□□□ 0.33
HOXA3-202ENST00000396352 CCDC17Q96LX7 622 aa17.14■□□□□ 0.33
HOXA3-202ENST00000396352 METTL14Q9HCE5 456 aaKnown RBP17.14■□□□□ 0.33
HOXA3-202ENST00000396352 SUCLA2Q9P2R7 463 aaPredicted RBP17.14■□□□□ 0.33
HOXA3-202ENST00000396352 ZMYM2Q9UBW7 1377 aa17.14■□□□□ 0.33
HOXA3-202ENST00000396352 ITGA4P13612 1032 aa17.14■□□□□ 0.33
HOXA3-202ENST00000396352 INPP5BP32019 993 aa17.14■□□□□ 0.33
HOXA3-202ENST00000396352 DDR1Q08345 913 aa17.14■□□□□ 0.33
HOXA3-202ENST00000396352 KCTD19Q17RG1 926 aaPredicted RBP17.14■□□□□ 0.33
HOXA3-202ENST00000396352 TCERG1LQ5VWI1 586 aa17.14■□□□□ 0.33
HOXA3-202ENST00000396352 NT5DC3Q86UY8 548 aa17.14■□□□□ 0.33
HOXA3-202ENST00000396352 OR2W6PQ8NHA6 318 aa17.14■□□□□ 0.33
HOXA3-202ENST00000396352 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
HOXA3-202ENST00000396352 RBBP6Q7Z6E9 1792 aaKnown RBP17.13■□□□□ 0.33
HOXA3-202ENST00000396352 GTPBP10A4D1E9 387 aaKnown RBP17.13■□□□□ 0.33
HOXA3-202ENST00000396352 KLRG2A4D1S0 409 aaPredicted RBP17.13■□□□□ 0.33
HOXA3-202ENST00000396352 FAM196BA6NMK8 535 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 PPEF1O14829 653 aaPredicted RBP17.13■□□□□ 0.33
HOXA3-202ENST00000396352 POLD1P28340 1107 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 SREBF1P36956 1147 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 SNAP25P60880 206 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 ZNF844Q08AG5 666 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 SLFN13Q68D06 897 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 PEX26Q7Z412 305 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 SIAH1Q8IUQ4 282 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 SP8Q8IXZ3 490 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 ZNF473Q8WTR7 871 aaKnown RBP17.13■□□□□ 0.33
HOXA3-202ENST00000396352 BHMT2Q9H2M3 363 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 INTUQ9ULD6 942 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 MSH4O15457 936 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 H2AFZP0C0S5 128 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 FLT3P36888 993 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 H2AFVQ71UI9 128 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 HES6Q96HZ4 224 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 CCDC188H7C350 402 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 KRIT1O00522 736 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 CLIC2O15247 247 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 TGFB1I1O43294 461 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 SEC24CP53992 1094 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 CYP4A11Q02928 519 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 HHIPL2Q6UWX4 724 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 SLC30A5Q8TAD4 765 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 LNX1Q8TBB1 728 aaPredicted RBP17.13■□□□□ 0.33
HOXA3-202ENST00000396352 MYCBPAPQ8TBZ2 947 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 IKZF4Q9H2S9 585 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 NYAP2Q9P242 653 aa17.13■□□□□ 0.33
HOXA3-202ENST00000396352 TMCO5BA8MYB1 307 aa17.12■□□□□ 0.33
HOXA3-202ENST00000396352 GCNT3O95395 438 aa17.12■□□□□ 0.33
HOXA3-202ENST00000396352 RPL13P26373 211 aaKnown RBP17.12■□□□□ 0.33
HOXA3-202ENST00000396352 NPEPPSP55786 919 aa17.12■□□□□ 0.33
HOXA3-202ENST00000396352 SPATS2Q86XZ4 545 aaKnown RBP17.12■□□□□ 0.33
HOXA3-202ENST00000396352 SEC14L1Q92503 715 aa17.12■□□□□ 0.33
HOXA3-202ENST00000396352 FAM20AQ96MK3 541 aa17.12■□□□□ 0.33
HOXA3-202ENST00000396352 AMACRQ9UHK6 382 aa17.12■□□□□ 0.33
HOXA3-202ENST00000396352 DAAM2Q86T65 1068 aa17.12■□□□□ 0.33
HOXA3-202ENST00000396352 NLRP14Q86W24 1093 aa17.12■□□□□ 0.33
HOXA3-202ENST00000396352 LRRC45Q96CN5 670 aa17.12■□□□□ 0.33
HOXA3-202ENST00000396352 CCT8L2Q96SF2 557 aa17.12■□□□□ 0.33
HOXA3-202ENST00000396352 OLFML3Q9NRN5 406 aa17.12■□□□□ 0.33
HOXA3-202ENST00000396352 SRRM3A6NNA2 597 aaPredicted RBP17.11■□□□□ 0.33
HOXA3-202ENST00000396352 GCOM1H8Y6P7 765 aaPredicted RBP17.11■□□□□ 0.33
HOXA3-202ENST00000396352 MEFVO15553 781 aaPredicted RBP17.11■□□□□ 0.33
HOXA3-202ENST00000396352 GFPT2O94808 682 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 MYZAPP0CAP1 466 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 TAL1P17542 331 aaPredicted RBP17.11■□□□□ 0.33
HOXA3-202ENST00000396352 MMS22LQ6ZRQ5 1243 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 VPS36Q86VN1 386 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 SUGP1Q8IWZ8 645 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms