RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 ANO5Q75V66 913 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 ZNF720Q7Z2F6 126 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 SLC17A8Q8NDX2 589 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 AFAP1L1Q8TED9 768 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 KCNN1Q92952 543 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 HHIPL1Q96JK4 782 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 GABBR1Q9UBS5 961 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 GSTTP1A0A1W2PQM5 241 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 LGALS16A8MUM7 142 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 TEX33O43247 280 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 HIP1RO75146 1068 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 PPP1R37O75864 691 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 SLC10A3P09131 477 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 MSNP26038 577 aaKnown RBP13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 RTP1P59025 263 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 MKRN3Q13064 507 aaKnown RBP13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 IRF5Q13568 498 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 GRB14Q14449 540 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 STXBP4Q6ZWJ1 553 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 CYFIP1Q7L576 1253 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 MYCT1Q8N699 235 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 KIAA1524Q8TCG1 905 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 ZNF830Q96NB3 372 aaPredicted RBP13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 MRPL44Q9H9J2 332 aaKnown RBP13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 C17orf75Q9HAS0 396 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 TBC1D7Q9P0N9 293 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 LARSQ9P2J5 1176 aaKnown RBP13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 PPME1Q9Y570 386 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 PCDHB13Q9Y5F0 798 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 TLL2Q9Y6L7 1015 aa13.14□□□□□ -0.31
GTF2A2-202ENST00000396060 SLC15A5A6NIM6 579 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 PLS3P13797 630 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 ADORA2AP29274 412 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 DNM2P50570 870 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 CASP5P51878 434 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 XKR9Q5GH70 373 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 CELF3Q5SZQ8 465 aaKnown RBP13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 ARMCX5Q6P1M9 558 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 CCDC60Q8IWA6 550 aaPredicted RBP13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 MSL3Q8N5Y2 521 aaKnown RBP13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 SEPT1Q8WYJ6 367 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 CCDC102AQ96A19 550 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 CNOT6LQ96LI5 555 aaKnown RBP13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 DRC1Q96MC2 740 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 NTPCRQ9BSD7 190 aaKnown RBP13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 TUBGCP2Q9BSJ2 902 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 NIFKQ9BYG3 293 aaKnown RBP13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 TMX1Q9H3N1 280 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 ZHX3Q9H4I2 956 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 VTA1Q9NP79 307 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 TYW1Q9NV66 732 aaKnown RBP13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 KCNG1Q9UIX4 513 aa13.13□□□□□ -0.31
GTF2A2-202ENST00000396060 MYH9P35579 1960 aaKnown RBP13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 BACH1O14867 736 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 CALUO43852 315 aaPredicted RBP13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 LGR5O75473 907 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 DGAT1O75907 488 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 MYBP10242 640 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 PRKCSHP14314 528 aaPredicted RBP13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 KCNJ6P48051 423 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 SNRPFP62306 86 aaKnown RBP13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 MYBPC2Q14324 1141 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 GPR142Q7Z601 462 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 PLEKHH3Q7Z736 793 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 FAM178BQ8IXR5 827 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 ZNF526Q8TF50 670 aaPredicted RBP13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 SPIRE2Q8WWL2 714 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 ZNF302Q9NR11 478 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 KCND1Q9NSA2 647 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 TAB2Q9NYJ8 693 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 IVNS1ABPQ9Y6Y0 642 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 ZNF236Q9UL36 1845 aa13.12□□□□□ -0.31
GTF2A2-202ENST00000396060 SFI1A8K8P3 1242 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 FAM155AB1AL88 458 aaPredicted RBP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 IGF2BP3O00425 579 aaKnown RBP eCLIP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 CETN3O15182 167 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 PRPF6O94906 941 aaKnown RBP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 GGPS1O95749 300 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 TPM2P07951 284 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 ATP4AP20648 1035 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 SCP2P22307 547 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 SFPQP23246 707 aaKnown RBP eCLIP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 RPL13P26373 211 aaKnown RBP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 CLCN1P35523 988 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 CCZ1BP86790 482 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 CCZ1P86791 482 aaPredicted RBP13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 TRIM14Q14142 442 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 MAN2A1Q16706 1144 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 MIIPQ5JXC2 388 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 ODR4Q5SWX8 454 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 FAM160B1Q5W0V3 765 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 ARMCX2Q7L311 632 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 CCDC112Q8NEF3 446 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 MCPH1Q8NEM0 835 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 GOLGA5Q8TBA6 731 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
GTF2A2-202ENST00000396060 IQCDQ96DY2 449 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms