RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MED7O43513 233 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 ZC3H11AO75152 810 aaKnown RBP eCLIP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 CENPPQ6IPU0 288 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 SCYL3Q8IZE3 742 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 RAD54LQ92698 747 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PLCD4Q9BRC7 762 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 LXNQ9BS40 222 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 CDC23Q9UJX2 597 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 SCINQ9Y6U3 715 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PRPF6O94906 941 aaKnown RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 SLFNL1Q499Z3 407 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 HSP90AA4PQ58FG1 418 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 USP50Q70EL3 339 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 WDR18Q9BV38 432 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 CYP3A4P08684 503 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 CIITAP33076 1130 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 CXCL9Q07325 125 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 SMC1AQ14683 1233 aaKnown RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF569Q5MCW4 686 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 ANKS4BQ8N8V4 417 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 ATP6V0A4Q9HBG4 840 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 KMT5AQ9NQR1 393 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 ABHD10Q9NUJ1 306 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 LRRIQ4A6NIV6 560 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 NMT2O60551 498 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 ZBTB7AO95365 584 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 KMT5BQ4FZB7 885 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 KRT39Q6A163 491 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 ARMCX2Q7L311 632 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 METTL16Q86W50 562 aaKnown RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 SYT2Q8N9I0 419 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 SPATA20Q8TB22 786 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 AKT1S1Q96B36 256 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 KIAA1217Q5T5P2 1943 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 BCORQ6W2J9 1755 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 KIAA0754O94854 1291 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 CYP2C19P33261 490 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 TAP1Q03518 808 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 ADSSL1Q8N142 457 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PROCA1Q8NCQ7 364 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PBKQ96KB5 322 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 HESX1Q9UBX0 185 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 INTUQ9ULD6 942 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 NRAPQ86VF7 1730 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 NKRFO15226 690 aaKnown RBP eCLIP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PRPF4BQ13523 1007 aaKnown RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PADI6Q6TGC4 694 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF677Q86XU0 584 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PPP2R2CQ9Y2T4 447 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PSMD14O00487 310 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 SART1O43290 800 aaKnown RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 VEGFAP15692 232 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PAX3P23760 479 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 YWHABP31946 246 aaKnown RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 SSR1P43307 286 aaKnown RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PAK2Q13177 524 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PPP2R5CQ13362 524 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 LAMC2Q13753 1193 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 HADHQ16836 314 aaKnown RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 REM2Q8IYK8 340 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 MXRA8Q9BRK3 442 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 SMARCAD1Q9H4L7 1026 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 FBXL5Q9UKA1 691 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 POTEMA6NI47 508 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 SPOPO43791 374 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 HSF2BPO75031 334 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 STILQ15468 1287 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 EMBQ6PCB8 327 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 PDZD4Q76G19 769 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 FAM129AQ9BZQ8 928 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 AP5M1Q9H0R1 490 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 SEPT9Q9UHD8 586 aaPredicted RBP3.68□□□□□ -1.82
VPS13C-203ENST00000395896 HYOU1Q9Y4L1 999 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 TOGARAM1Q9Y4F4 1720 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 C10orf71Q711Q0 1435 aa3.68□□□□□ -1.82
VPS13C-203ENST00000395896 MACROD2A1Z1Q3 448 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 INO80B-WBP1J3KQ70 363 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 NR3C2P08235 984 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CASP14P31944 242 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 SLC16A2P36021 539 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 RPS6P62753 249 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 DUOXA2Q1HG44 320 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 LGSNQ5TDP6 509 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CCDC91Q7Z6B0 441 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 STAG2Q8N3U4 1231 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 PRMT6Q96LA8 375 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 LIMA1Q9UHB6 759 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CACNA1SQ13698 1873 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 GUCY2CP25092 1073 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 PHKA2P46019 1235 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 SREBF2Q12772 1141 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 GADL1Q6ZQY3 521 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 POTEDQ86YR6 584 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 RASGRP4Q8TDF6 673 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CAPN11Q9UMQ6 739 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CYP3A7-CYP3A51PA0A087WV96 503 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CYP3A7P24462 503 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 KIF11P52732 1056 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 ENPEPQ07075 957 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 KCNH2Q12809 1159 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms