RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 PARD3BQ8TEW8 1205 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 SGSM3Q96HU1 749 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 VPS37BQ9H9H4 285 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 KLHL14Q9P2G3 628 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 SALL4Q9UJQ4 1053 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 FAM205AQ6ZU69 1335 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 FLOT1O75955 427 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 FAM107AO95990 144 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 GNAT2P19087 354 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 STAT3P40763 770 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 C2CD6Q53TS8 623 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 AADACL2Q6P093 401 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 LMNTD2Q8IXW0 634 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 EPS8L3Q8TE67 593 aaKnown RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 CCDC127Q96BQ5 260 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 TAF1DQ9H5J8 278 aaPredicted RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 VIPAS39Q9H9C1 493 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 SUGT1Q9Y2Z0 365 aa9.57□□□□□ -0.88
RTN4-206ENST00000394611 TNRC6CQ9HCJ0 1690 aaKnown RBP9.57□□□□□ -0.88
RTN4-206ENST00000394611 THAP12O43422 761 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 XRCC5P13010 732 aaKnown RBP9.56□□□□□ -0.88
RTN4-206ENST00000394611 SLC9A1P19634 815 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 RAD23BP54727 409 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 APBB1IPQ7Z5R6 666 aaPredicted RBP9.56□□□□□ -0.88
RTN4-206ENST00000394611 SPICE1Q8N0Z3 855 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 VPS52Q8N1B4 723 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 ABTB1Q969K4 478 aaPredicted RBP9.56□□□□□ -0.88
RTN4-206ENST00000394611 CHMP6Q96FZ7 201 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 ZMYND12Q9H0C1 365 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 ARMCX3Q9UH62 379 aaPredicted RBP9.56□□□□□ -0.88
RTN4-206ENST00000394611 GOLGA8SH3BPF8 625 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 GOLGA8MH3BSY2 632 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 POLD1P28340 1107 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 PTGER2P43116 358 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 DR1Q01658 176 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 TCP10Q12799 353 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 EXOC3L4Q17RC7 722 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 STMN2Q93045 179 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 TSC22D3Q99576 134 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 YY1AP1Q9H869 796 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 LEMD3Q9Y2U8 911 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 TAF1P21675 1872 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 GOLGA8RI6L899 631 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 RASGRF2O14827 1237 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 SHBGP04278 402 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 GCFC2P16383 781 aaKnown RBP9.56□□□□□ -0.88
RTN4-206ENST00000394611 LONP1P36776 959 aaKnown RBP9.56□□□□□ -0.88
RTN4-206ENST00000394611 IRX4P78413 519 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 AMPD2Q01433 879 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 NBPF20Q3BBV1 942 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 PRR16Q569H4 304 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 CFAP157Q5JU67 520 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 SLC10A5Q5PT55 438 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 SEL1L2Q5TEA6 688 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 NEK8Q86SG6 692 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 FUKQ8N0W3 1084 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 IFT74Q96LB3 600 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 NOP53Q9NZM5 478 aaKnown RBP9.56□□□□□ -0.88
RTN4-206ENST00000394611 FAM196BA6NMK8 535 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 ZNF263O14978 683 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 ADCY8P40145 1251 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 KCNJ2P63252 427 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 IFI35P80217 286 aaPredicted RBP9.56□□□□□ -0.88
RTN4-206ENST00000394611 RBBP5Q15291 538 aaKnown RBP9.56□□□□□ -0.88
RTN4-206ENST00000394611 TMTC3Q6ZXV5 915 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 ARMC2Q8NEN0 867 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 NEK9Q8TD19 979 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 ZNF622Q969S3 477 aaKnown RBP eCLIP9.56□□□□□ -0.882e-35■□□□□ 10.6
RTN4-206ENST00000394611 TMEM237Q96Q45 408 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 MXD3Q9BW11 206 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 TLR10Q9BXR5 811 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 TRIM4Q9C037 500 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 VCPKMTQ9H867 229 aa9.56□□□□□ -0.88
RTN4-206ENST00000394611 LRRD1A4D1F6 860 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 UBOX5O94941 541 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 FAM13AO94988 1023 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 CCNHP51946 323 aaPredicted RBP9.55□□□□□ -0.88
RTN4-206ENST00000394611 ERVK-9P63128 1117 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 ATP2C1P98194 919 aaPredicted RBP9.55□□□□□ -0.88
RTN4-206ENST00000394611 PPP2R5CQ13362 524 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 PSMD6Q15008 389 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 ADGRA1Q86SQ6 560 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 CCDC65Q8IXS2 484 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 MYCT1Q8N699 235 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 C1orf54Q8WWF1 131 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 MIEF2Q96C03 454 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 SGIP1Q9BQI5 828 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 PLA2G12BQ9BX93 195 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 TRIM9Q9C026 710 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 ABCF3Q9NUQ8 709 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 GCNT4Q9P109 453 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 ANO9A1A5B4 782 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 DNM1LO00429 736 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 FOXP2O15409 715 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 OPHN1O60890 802 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 TRIM49P0CI25 452 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 TRIM49CP0CI26 452 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 SRGNP10124 158 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 GNA11P29992 359 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 CHRNA5P30532 468 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms