RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 PACSIN1Q9BY11 444 aa20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 VCPKMTQ9H867 229 aa20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 BZW2Q9Y6E2 419 aaKnown RBP20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 AHDC1Q5TGY3 1603 aaPredicted RBP20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 SREBF1P36956 1147 aa20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 FAM71BQ8TC56 605 aa20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 PDXKO00764 312 aa20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 MTMR1Q13613 665 aa20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 BEND6Q5SZJ8 279 aaPredicted RBP20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 RINT1Q6NUQ1 792 aa20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 SH3BP5LQ7L8J4 393 aa20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 GLYCTKQ8IVS8 523 aa20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 RMDN3Q96TC7 470 aa20.5■□□□□ 0.87
SMARCC2-203ENST00000394023 PTK2Q05397 1052 aa20.49■□□□□ 0.87
SMARCC2-203ENST00000394023 SLC15A2Q16348 729 aa20.49■□□□□ 0.87
SMARCC2-203ENST00000394023 TBX3O15119 743 aa20.49■□□□□ 0.87
SMARCC2-203ENST00000394023 HIP1RO75146 1068 aa20.49■□□□□ 0.87
SMARCC2-203ENST00000394023 FERP16591 822 aa20.49■□□□□ 0.87
SMARCC2-203ENST00000394023 LRRC55Q6ZSA7 311 aa20.49■□□□□ 0.87
SMARCC2-203ENST00000394023 CCDC25Q86WR0 208 aa20.49■□□□□ 0.87
SMARCC2-203ENST00000394023 FNBP1Q96RU3 617 aa20.49■□□□□ 0.87
SMARCC2-203ENST00000394023 SPDYE2BA6NHP3 402 aa20.49■□□□□ 0.87
SMARCC2-203ENST00000394023 AKAP3O75969 853 aa20.49■□□□□ 0.87
SMARCC2-203ENST00000394023 SPDYE6P0CI01 402 aa20.49■□□□□ 0.87
SMARCC2-203ENST00000394023 SLC18A3Q16572 532 aa20.49■□□□□ 0.87
SMARCC2-203ENST00000394023 SLC16A4O15374 487 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 DPEP1P16444 411 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 NBPF9Q3BBW0 867 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 GMCL1Q96IK5 515 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 IKZF4Q9H2S9 585 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 SIK3Q9Y2K2 1263 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 ANKRD36CQ5JPF3 1778 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 DRAP1Q14919 205 aaPredicted RBP20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 USP37Q86T82 979 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 C10orf67Q8IYJ2 551 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 STIM2Q9P246 746 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 FEM1BQ9UK73 627 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 MEA1Q16626 185 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 FRMD5Q7Z6J6 570 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 PRPF38AQ8NAV1 312 aaKnown RBP20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 CCDC26Q8TAB7 109 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 CEP170P1Q96L14 293 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 MED4Q9NPJ6 270 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 C4AP0C0L4 1744 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 C4BP0C0L5 1744 aa20.48■□□□□ 0.87
SMARCC2-203ENST00000394023 GGCXP38435 758 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 FIGNQ5HY92 759 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 ZNF746Q6NUN9 644 aaPredicted RBP20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 PHLDB2Q86SQ0 1253 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 POMGNT1Q8WZA1 660 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 GLIS2Q9BZE0 524 aaPredicted RBP20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 MYO3BQ8WXR4 1341 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 KIAA0754O94854 1291 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 EDRF1Q3B7T1 1238 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 DEFB132Q7Z7B7 95 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 GOLGA5Q8TBA6 731 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 MTMR8Q96EF0 704 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 SSU72P8A0A1W2PR75 194 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 TMOD4Q9NZQ9 345 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 PITPNM2Q9BZ72 1349 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 POTEJP0CG39 1038 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 TNNI1P19237 187 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 HNRNPH2P55795 449 aaKnown RBP20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 MESDQ14696 234 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 TRIM59Q8IWR1 403 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 SYCE1Q8N0S2 351 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 IFT74Q96LB3 600 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 EDEM3Q9BZQ6 932 aa20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 RBM12Q9NTZ6 932 aaKnown RBP20.47■□□□□ 0.87
SMARCC2-203ENST00000394023 ZRANB2O95218 330 aaKnown RBP eCLIP20.46■□□□□ 0.873e-7■■■□□ 18.2
SMARCC2-203ENST00000394023 COG2Q14746 738 aa20.46■□□□□ 0.87
SMARCC2-203ENST00000394023 RNF207Q6ZRF8 634 aa20.46■□□□□ 0.87
SMARCC2-203ENST00000394023 EXOC7Q9UPT5 735 aa20.46■□□□□ 0.87
SMARCC2-203ENST00000394023 COL4A1P02462 1669 aa20.46■□□□□ 0.87
SMARCC2-203ENST00000394023 IGKV6D-41A0A0C4DH26 115 aa20.46■□□□□ 0.87
SMARCC2-203ENST00000394023 HNRNPDLO14979 420 aaKnown RBP20.46■□□□□ 0.87
SMARCC2-203ENST00000394023 MKL1Q969V6 931 aa20.46■□□□□ 0.87
SMARCC2-203ENST00000394023 KCNMB3Q9NPA1 279 aa20.46■□□□□ 0.87
SMARCC2-203ENST00000394023 ZNRF3Q9ULT6 936 aa20.46■□□□□ 0.87
SMARCC2-203ENST00000394023 SHANK3Q9BYB0 1731 aa20.46■□□□□ 0.87
SMARCC2-203ENST00000394023 SF3A3Q12874 501 aaKnown RBP eCLIP20.46■□□□□ 0.874e-11■■■■■ 39.5
SMARCC2-203ENST00000394023 ACCSQ96QU6 501 aa20.46■□□□□ 0.87
SMARCC2-203ENST00000394023 KCTD19Q17RG1 926 aaPredicted RBP20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 GRIPAP1Q4V328 841 aa20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 RNF10Q8N5U6 811 aaKnown RBP20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 DMGDHQ9UI17 866 aaKnown RBP20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 IRS2Q9Y4H2 1338 aa20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 H3BQF6 201 aa20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 IVLP07476 585 aa20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 KCNMA1Q12791 1236 aa20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 DMP1Q13316 513 aaPredicted RBP20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 GMCL1P1Q8NEA9 526 aa20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 TAOK3Q9H2K8 898 aa20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 BCAS3Q9H6U6 928 aa20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 SEPT9Q9UHD8 586 aaPredicted RBP20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 L1RE1Q9UN81 338 aa20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 PDE2AO00408 941 aaPredicted RBP20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 MAP2K1Q02750 393 aaPredicted RBP20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 MTMR2Q13614 643 aa20.45■□□□□ 0.86
SMARCC2-203ENST00000394023 CEP85LQ5SZL2 805 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms