RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 FAM153CQ494X1 144 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 USH1GQ495M9 461 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 HAUS3Q68CZ6 603 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.21□□□□□ -1.1
VTI1A-201ENST00000393077 MARK2Q7KZI7 788 aaKnown RBP8.21□□□□□ -1.1
VTI1A-201ENST00000393077 SMYD1Q8NB12 490 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 SPIRE2Q8WWL2 714 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 LRRC27Q9C0I9 530 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 DNAI2Q9GZS0 605 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 ARHGEF10LQ9HCE6 1279 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 FAM153AQ9UHL3 310 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 CARMIL3Q8ND23 1372 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 A0A0D9SFI3 127 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 SPAG7O75391 227 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 DDHD2O94830 711 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 BAG3O95817 575 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 PLTPP55058 493 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 BTKQ06187 659 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 PTPROQ16827 1216 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 LIN52Q52LA3 116 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 KRT40Q6A162 431 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 RFX8Q6ZV50 586 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 KRT27Q7Z3Y8 459 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.21□□□□□ -1.1
VTI1A-201ENST00000393077 IQCKQ8N0W5 287 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 FHDC1Q9C0D6 1143 aaPredicted RBP8.21□□□□□ -1.1
VTI1A-201ENST00000393077 FAM207AQ9NSI2 230 aaPredicted RBP8.21□□□□□ -1.1
VTI1A-201ENST00000393077 ETNK2Q9NVF9 386 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.21□□□□□ -1.11e-6■■□□□ 13.5
VTI1A-201ENST00000393077 EHD2Q9NZN4 543 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 ADD3Q9UEY8 706 aaKnown RBP8.21□□□□□ -1.1
VTI1A-201ENST00000393077 PCDHA13Q9Y5I0 950 aa8.21□□□□□ -1.1
VTI1A-201ENST00000393077 CDC42BPGQ6DT37 1551 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 NEURL4Q96JN8 1562 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 ERVV-2B6SEH9 535 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 PDLIM1O00151 329 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 SEMA3EO15041 775 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 SERPINB6P35237 376 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 ERFP50548 548 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 MRPS9P82933 396 aaKnown RBP8.2□□□□□ -1.1
VTI1A-201ENST00000393077 KIF22Q14807 665 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 RRAGAQ7L523 313 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 UBE2Q1Q7Z7E8 422 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 CD302Q8IX05 232 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 CSGALNACT2Q8N6G5 542 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 STKLD1Q8NE28 680 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 PTPRN2Q92932 1015 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 MS4A14Q96JA4 679 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 TGS1Q96RS0 853 aaKnown RBP8.2□□□□□ -1.1
VTI1A-201ENST00000393077 TBC1D7Q9P0N9 293 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 SAP30BPQ9UHR5 308 aaKnown RBP8.2□□□□□ -1.1
VTI1A-201ENST00000393077 CCPG1Q9ULG6 757 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 TRIM75PA6NK02 468 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 PDE2AO00408 941 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-201ENST00000393077 STRNO43815 780 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 CBFA2T3O75081 653 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 ESRRAP11474 423 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-201ENST00000393077 HARSP12081 509 aaKnown RBP8.2□□□□□ -1.1
VTI1A-201ENST00000393077 TARSP26639 723 aaKnown RBP8.2□□□□□ -1.1
VTI1A-201ENST00000393077 CCR3P51677 355 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 AP2B1P63010 937 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 STRN3Q13033 797 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 B3GNT6Q6ZMB0 384 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 DQX1Q8TE96 717 aaKnown RBP8.2□□□□□ -1.1
VTI1A-201ENST00000393077 TUBB6Q9BUF5 446 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 HAO1Q9UJM8 370 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 TMEM98Q9Y2Y6 226 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 IVNS1ABPQ9Y6Y0 642 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 MGEA5O60502 916 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 TSPAN9O75954 239 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 GLI1P08151 1106 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 KRT4P19013 534 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 OXCT1P55809 520 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 ESRRGP62508 458 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 C16orf72Q14CZ0 275 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 CYTH1Q15438 398 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 MMEL1Q495T6 779 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 C1orf167Q5SNV9 1468 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 WASHC2DQ5SRD0 308 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 FAM182BQ5T319 152 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 METTL16Q86W50 562 aaKnown RBP8.2□□□□□ -1.1
VTI1A-201ENST00000393077 UCMAQ8WVF2 138 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 ZNF274Q96GC6 653 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-201ENST00000393077 COQ7Q99807 217 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 RXFP1Q9HBX9 757 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 GPCPD1Q9NPB8 672 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 NLRC4Q9NPP4 1024 aa8.2□□□□□ -1.1
VTI1A-201ENST00000393077 TDRKHQ9Y2W6 561 aaKnown RBP8.2□□□□□ -1.1
VTI1A-201ENST00000393077 H7C1D1 291 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 CETN2P41208 172 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 LRRC36Q1X8D7 754 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 ZNF394Q53GI3 561 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 RILPL1Q5EBL4 403 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 TMCO4Q5TGY1 634 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 PDXDC1Q6P996 788 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 PEX26Q7Z412 305 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 CCDC24Q8N4L8 307 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 CASKIN2Q8WXE0 1202 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 GRAMD1AQ96CP6 724 aa8.19□□□□□ -1.1
VTI1A-201ENST00000393077 SPATA16Q9BXB7 569 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms