RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ALOX5P09917 674 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 TMEM191BP0C7N4 346 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ARL14EPLP0DKL9 152 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PIM1P11309 404 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 HNRNPLP14866 589 aaKnown RBP eCLIP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 NME2P22392 152 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 FDXRP22570 491 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ARNTP27540 789 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 GRK4P32298 578 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 KRT9P35527 623 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SOX11P35716 441 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 RFC5P40937 340 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 BCL6P41182 706 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ETV4P43268 484 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 GLIPR1P48060 266 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 TNNI2P48788 182 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 RABGGTBP53611 331 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 RRADP55042 308 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SEC13P55735 322 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 LGALS4P56470 323 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SOX10P56693 466 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 DSCR10P59022 87 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 CLDN10P78369 228 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 MXRA7P84157 204 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 GUCY1B3Q02153 619 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF252P-AS1Q0IIN9 211 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 COASYQ13057 564 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 RESTQ13127 1097 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SEMA5AQ13591 1074 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 RIN1Q13671 783 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 KEAP1Q14145 624 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 CAPRIN1Q14444 709 aaKnown RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 NFATC4Q14934 902 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ELAVL1Q15717 326 aaKnown RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 INPP5JQ15735 1006 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 CR1LQ2VPA4 569 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SUPT20HL1Q3ZLR7 823 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 DCAF17Q5H9S7 520 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 COX20Q5RI15 118 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 GPR157Q5UAW9 335 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 DAB2IPQ5VWQ8 1189 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SLC6A19Q695T7 634 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 NAIF1Q69YI7 327 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 IQSEC1Q6DN90 963 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SUMO4Q6EEV6 95 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SLC18B1Q6NT16 456 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ARMC6Q6NXE6 501 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PDXDC1Q6P996 788 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF449Q6P9G9 518 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 USP17L6PQ6QN14 398 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PI16Q6UXB8 463 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 NHLRC1Q6VVB1 395 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 RSRC2Q7L4I2 434 aaKnown RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 IRF2BP2Q7Z5L9 587 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 GPR149Q86SP6 731 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 CLEC14AQ86T13 490 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 GTSCR1Q86UQ5 136 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 NAA40Q86UY6 237 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SYT12Q8IV01 421 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 TMEM192Q8IY95 271 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 FGFRL1Q8N441 504 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ABTB2Q8N961 1025 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 RETREG2Q8NC44 543 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 RGS22Q8NE09 1264 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SHCBP1Q8NEM2 672 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PRSS3P2Q8NHM4 247 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF398Q8TD17 642 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ACTRT2Q8TDY3 377 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 MICAL1Q8TDZ2 1067 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF721Q8TF20 911 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SEC14L1Q92503 715 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ACSF2Q96CM8 615 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 NUDT16Q96DE0 195 aaKnown RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PGBD4Q96DM1 585 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF594Q96JF6 807 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PDLIM2Q96JY6 352 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 TMEM87BQ96K49 555 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 SNX27Q96L92 541 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 LINC00167Q96N53 147 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 MNTQ99583 582 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 TIMP4Q99727 224 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 EGFL8Q99944 293 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 HINFPQ9BQA5 517 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ZPBPQ9BS86 351 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 RTBDNQ9BSG5 229 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 GNL3Q9BVP2 549 aaKnown RBP eCLIP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 BRINP2Q9C0B6 783 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PRSS22Q9GZN4 317 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 MANSC1Q9H8J5 431 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 ZNF408Q9H9D4 720 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 CBX8Q9HC52 389 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 NCOA5Q9HCD5 579 aaKnown RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 TSHZ2Q9NRE2 1034 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 IL17RBQ9NRM6 502 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 AP5S1Q9NUS5 200 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 PRR34Q9NV39 138 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 TRNAU1APQ9NX07 287 aaKnown RBP-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 CACNA2D2Q9NY47 1150 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 DLGAP2Q9P1A6 1054 aa-0.09□□□□□ -2.42
TRAJ28-201ENST00000390509 GPN3Q9UHW5 284 aaPredicted RBP-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms