RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 PIN4Q9Y237 131 aaKnown RBP15.99■□□□□ 0.15
LRRK1-201ENST00000388948 SPOPLQ6IQ16 392 aa15.99■□□□□ 0.15
LRRK1-201ENST00000388948 KCNV1Q6PIU1 500 aa15.99■□□□□ 0.15
LRRK1-201ENST00000388948 DDX53Q86TM3 631 aaKnown RBP15.99■□□□□ 0.15
LRRK1-201ENST00000388948 KATNAL1Q9BW62 490 aa15.99■□□□□ 0.15
LRRK1-201ENST00000388948 MYL1P05976 194 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 ANGPTL8Q6UXH0 198 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 EXT2Q93063 718 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 MRPL4Q9BYD3 311 aaKnown RBP15.98■□□□□ 0.15
LRRK1-201ENST00000388948 KLHL14Q9P2G3 628 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 PRAMEF18Q5VWM3 479 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 SPON2Q9BUD6 331 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 KIAA1586Q9HCI6 787 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 SLC16A4O15374 487 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 TRAPPC3O43617 180 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 ELF2Q15723 593 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 CYFIP1Q7L576 1253 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 NSUN7Q8NE18 718 aaKnown RBP15.98■□□□□ 0.15
LRRK1-201ENST00000388948 LRGUKQ96M69 825 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 SLC4A7Q9Y6M7 1214 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.98■□□□□ 0.15
LRRK1-201ENST00000388948 HP1BP3Q5SSJ5 553 aaPredicted RBP15.98■□□□□ 0.15
LRRK1-201ENST00000388948 NT5C2P49902 561 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 CFAP36Q96G28 342 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 SHROOM2Q13796 1616 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 QARSP47897 775 aaKnown RBP15.98■□□□□ 0.15
LRRK1-201ENST00000388948 CYP4F22Q6NT55 531 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 TOGARAM2Q6ZUX3 1019 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 RSRC1Q96IZ7 334 aaKnown RBP15.98■□□□□ 0.15
LRRK1-201ENST00000388948 DNAJC5Q9H3Z4 198 aa15.98■□□□□ 0.15
LRRK1-201ENST00000388948 ESRRBO95718 433 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 PAMP19021 973 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 KLC3Q6P597 504 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 DACT3Q96B18 629 aaPredicted RBP15.97■□□□□ 0.15
LRRK1-201ENST00000388948 VCX3AQ9NNX9 186 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 GOLGA8QA0A0J9YX86 632 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 GOLGA8OA6NCC3 632 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 GOLGA8NF8WBI6 632 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 ATICP31939 592 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 LIFRP42702 1097 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 TTC23LQ6PF05 361 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 LRRC8CQ8TDW0 803 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 MOCS3O95396 460 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 WHAMMP3Q1A5X7 153 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 DHX38Q92620 1227 aaKnown RBP15.97■□□□□ 0.15
LRRK1-201ENST00000388948 DPF3Q92784 378 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 SH3GLB2Q9NR46 395 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 KLHL8Q9P2G9 620 aaPredicted RBP15.97■□□□□ 0.15
LRRK1-201ENST00000388948 MOCS2O96007 188 aaPredicted RBP15.97■□□□□ 0.15
LRRK1-201ENST00000388948 ALDH1A1P00352 501 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 CASP14P31944 242 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 RAD51Q06609 339 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 C17orf53Q8N3J3 647 aaPredicted RBP15.97■□□□□ 0.15
LRRK1-201ENST00000388948 GBP7Q8N8V2 638 aaPredicted RBP15.97■□□□□ 0.15
LRRK1-201ENST00000388948 KIF12Q96FN5 646 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 DYDC2Q96IM9 177 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 POLR3FQ9H1D9 316 aaPredicted RBP15.97■□□□□ 0.15
LRRK1-201ENST00000388948 HMGB1P1B2RPK0 211 aaPredicted RBP15.97■□□□□ 0.15
LRRK1-201ENST00000388948 CREB3O43889 395 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 ZNF280CQ8ND82 737 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 FOXD4Q12950 439 aaPredicted RBP15.97■□□□□ 0.15
LRRK1-201ENST00000388948 STAG1Q8WVM7 1258 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 SUGT1Q9Y2Z0 365 aa15.97■□□□□ 0.15
LRRK1-201ENST00000388948 EFCAB8A8MWE9 144 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 NMT2O60551 498 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 TTC4O95801 387 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 MSH2P43246 934 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 CACNB2Q08289 660 aaPredicted RBP15.96■□□□□ 0.15
LRRK1-201ENST00000388948 ACBD5Q5T8D3 534 aaPredicted RBP15.96■□□□□ 0.15
LRRK1-201ENST00000388948 PDZD8Q8NEN9 1154 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 DEPDC1BQ8WUY9 529 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 ACAP3Q96P50 834 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 STK38LQ9Y2H1 464 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 IPO5O00410 1097 aaKnown RBP15.96■□□□□ 0.15
LRRK1-201ENST00000388948 DOLKQ9UPQ8 538 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 PCDHB6Q9Y5E3 794 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 RALAP11233 206 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 NSUN2Q08J23 767 aaKnown RBP eCLIP15.96■□□□□ 0.15
LRRK1-201ENST00000388948 STRIP1Q5VSL9 837 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 PASD1Q8IV76 773 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 HINFPQ9BQA5 517 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 EVI5O60447 810 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 CYBBP04839 570 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 ADGRF4Q8IZF3 695 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 POLR3EQ9NVU0 708 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 PRRG1O14668 218 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 COG7P83436 770 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 MXD4Q14582 209 aaPredicted RBP15.96■□□□□ 0.15
LRRK1-201ENST00000388948 DCP1AQ9NPI6 582 aaPredicted RBP15.96■□□□□ 0.15
LRRK1-201ENST00000388948 LMBRD1Q9NUN5 540 aa15.96■□□□□ 0.15
LRRK1-201ENST00000388948 GNGT2O14610 69 aa15.96■□□□□ 0.14
LRRK1-201ENST00000388948 CETPP11597 493 aa15.96■□□□□ 0.14
LRRK1-201ENST00000388948 GRIK1P39086 918 aa15.96■□□□□ 0.14
LRRK1-201ENST00000388948 KIF23Q02241 960 aaPredicted RBP15.96■□□□□ 0.14
LRRK1-201ENST00000388948 TMED8Q6PL24 325 aaPredicted RBP15.96■□□□□ 0.14
LRRK1-201ENST00000388948 NOP14P78316 857 aaKnown RBP15.95■□□□□ 0.14
LRRK1-201ENST00000388948 PPP4R3CPQ6ZMV5 832 aa15.95■□□□□ 0.14
LRRK1-201ENST00000388948 PPP2R2CQ9Y2T4 447 aa15.95■□□□□ 0.14
LRRK1-201ENST00000388948 NCAPD2Q15021 1401 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms