RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 RIOK3O14730 519 aaKnown RBP21.88■■□□□ 1.09
PDLIM5-205ENST00000380180 MAEAQ7L5Y9 396 aa21.88■■□□□ 1.09
PDLIM5-205ENST00000380180 TRMT1LQ7Z2T5 733 aaKnown RBP21.88■■□□□ 1.09
PDLIM5-205ENST00000380180 NCAPG2Q86XI2 1143 aa21.88■■□□□ 1.09
PDLIM5-205ENST00000380180 TRIM59Q8IWR1 403 aa21.88■■□□□ 1.09
PDLIM5-205ENST00000380180 RDM1Q8NG50 284 aa21.88■■□□□ 1.09
PDLIM5-205ENST00000380180 CDHR1Q96JP9 859 aa21.88■■□□□ 1.09
PDLIM5-205ENST00000380180 ADGRG1Q9Y653 693 aa21.88■■□□□ 1.09
PDLIM5-205ENST00000380180 PFASO15067 1338 aa21.88■■□□□ 1.09
PDLIM5-205ENST00000380180 TMEM150BA6NC51 233 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 SPATA31C2B4DYI2 1134 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 TGFB1I1O43294 461 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 CCDC175P0C221 793 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 FSTL1Q12841 308 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 MOGSQ13724 837 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 STXBP2Q15833 593 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 PNMA8AQ86V59 439 aaPredicted RBP21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 CCDC155Q8N6L0 562 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 CHP1Q99653 195 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 GRIN3BO60391 1043 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 CNMDO75829 334 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 TSR1Q2NL82 804 aaKnown RBP21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 GNPTABQ3T906 1256 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 UTP14CQ5TAP6 766 aaKnown RBP21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 TRIM65Q6PJ69 517 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 KIF18AQ8NI77 898 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 CLEC11AQ9Y240 323 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 ARID2Q68CP9 1835 aa21.87■■□□□ 1.09
PDLIM5-205ENST00000380180 A0A1W2PQJ5 194 aa21.86■■□□□ 1.09
PDLIM5-205ENST00000380180 TUBB4AP04350 444 aa21.86■■□□□ 1.09
PDLIM5-205ENST00000380180 ZBED6P86452 979 aa21.86■■□□□ 1.09
PDLIM5-205ENST00000380180 LDLRAD1Q5T700 205 aa21.86■■□□□ 1.09
PDLIM5-205ENST00000380180 WDR59Q6PJI9 974 aa21.86■■□□□ 1.09
PDLIM5-205ENST00000380180 SYT10Q6XYQ8 523 aa21.86■■□□□ 1.09
PDLIM5-205ENST00000380180 KSR1Q8IVT5 923 aa21.86■■□□□ 1.09
PDLIM5-205ENST00000380180 IKZF4Q9H2S9 585 aa21.86■■□□□ 1.09
PDLIM5-205ENST00000380180 MMRN2Q9H8L6 949 aa21.86■■□□□ 1.09
PDLIM5-205ENST00000380180 NFASCO94856 1347 aa21.86■■□□□ 1.09
PDLIM5-205ENST00000380180 ZMYM2Q9UBW7 1377 aa21.86■■□□□ 1.09
PDLIM5-205ENST00000380180 GOLGA6L9A6NEM1 432 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 CLIC2O15247 247 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 USO1O60763 962 aaKnown RBP21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 EIF3JO75822 258 aaKnown RBP21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 NR3C1P04150 777 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 RPL13P26373 211 aaKnown RBP21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 ALDH5A1P51649 535 aaPredicted RBP21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 ETF1P62495 437 aaKnown RBP21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 FASTKD5Q7L8L6 764 aaKnown RBP21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 SMAP1Q8IYB5 467 aaPredicted RBP21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 SMCR8Q8TEV9 937 aaPredicted RBP21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 IQCDQ96DY2 449 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 CCDC43Q96MW1 224 aaKnown RBP21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 JPH1Q9HDC5 661 aaPredicted RBP21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 FAM207AQ9NSI2 230 aaPredicted RBP21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 TELO2Q9Y4R8 837 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 BACH1O14867 736 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 POTEJP0CG39 1038 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 KCNMA1Q12791 1236 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 STXBP4Q6ZWJ1 553 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 FRMD5Q7Z6J6 570 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 R3HDMLQ9H3Y0 253 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 ANKEF1Q9NU02 776 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 GABBR1Q9UBS5 961 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 SLC9A2Q9UBY0 812 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 FAM184BQ9ULE4 1060 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 PCDHB13Q9Y5F0 798 aa21.85■■□□□ 1.09
PDLIM5-205ENST00000380180 EPHB6O15197 1021 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 GJA5P36382 358 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 NPEPPSP55786 919 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 SP2Q02086 613 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 XKR9Q5GH70 373 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 PLA2G4FQ68DD2 849 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 ZNF397Q8NF99 534 aaPredicted RBP21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 STRA6Q9BX79 667 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 TXNRD2Q9NNW7 524 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 LARSQ9P2J5 1176 aaKnown RBP21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 RBPJLQ9UBG7 517 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 UBE4BO95155 1302 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 POTEB2H3BUK9 544 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 SORBS3O60504 671 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 AKAP3O75969 853 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 SP4Q02446 784 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 GPAT2Q6NUI2 795 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 ANO5Q75V66 913 aa21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 ARMCX3Q9UH62 379 aaPredicted RBP21.84■■□□□ 1.09
PDLIM5-205ENST00000380180 SOWAHBA6NEL2 793 aa21.83■■□□□ 1.09
PDLIM5-205ENST00000380180 PSAPP07602 524 aa21.83■■□□□ 1.09
PDLIM5-205ENST00000380180 ICAM3P32942 547 aa21.83■■□□□ 1.09
PDLIM5-205ENST00000380180 CASP4P49662 377 aa21.83■■□□□ 1.09
PDLIM5-205ENST00000380180 ACTR2P61160 394 aa21.83■■□□□ 1.09
PDLIM5-205ENST00000380180 MEA1Q16626 185 aa21.83■■□□□ 1.09
PDLIM5-205ENST00000380180 Q3C1V9 767 aa21.83■■□□□ 1.09
PDLIM5-205ENST00000380180 MAP1SQ66K74 1059 aaPredicted RBP21.83■■□□□ 1.09
PDLIM5-205ENST00000380180 SWSAP1Q6NVH7 229 aa21.83■■□□□ 1.09
PDLIM5-205ENST00000380180 SLC10A4Q96EP9 437 aa21.83■■□□□ 1.09
PDLIM5-205ENST00000380180 ZNF862O60290 1169 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 PPP1R37O75864 691 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 OSBPP22059 807 aa21.82■■□□□ 1.08
PDLIM5-205ENST00000380180 KCNH2Q12809 1159 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms