RNA–Protein interactions for RNA: ENST00000378615.7

C11orf49-202, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene C11orf49, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-202ENST00000378615 USP17L15C9J2P7 530 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 USP17L13C9JLJ4 530 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 USP17L11C9JVI0 530 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 USP17L18D6R9N7 530 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 USP17L22D6RA61 530 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 USP17L17D6RBQ6 530 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 USP17L19D6RCP7 530 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 USP17L20D6RJB6 530 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 PGRMC1O00264 195 aaKnown RBP11.3□□□□□ -0.6
C11orf49-202ENST00000378615 MEIS2O14770 477 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 GLI1P08151 1106 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 LMNB1P20700 586 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 RFX1P22670 979 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 PON1P27169 355 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 HSPA9P38646 679 aaKnown RBP11.3□□□□□ -0.6
C11orf49-202ENST00000378615 GNGT1P63211 74 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 PTK2Q05397 1052 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 USP17L24Q0WX57 530 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 SPDYCQ5MJ68 293 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 ALKBH5Q6P6C2 394 aaKnown RBP11.3□□□□□ -0.6
C11orf49-202ENST00000378615 USP17L6PQ6QN14 398 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 MAATS1Q7Z4T9 603 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 PODNQ7Z5L7 613 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 FBXO11Q86XK2 927 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 CCDC26Q8TAB7 109 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 ZIM3Q96PE6 472 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 KRT12Q99456 494 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 IDI2Q9BXS1 227 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 ZHX3Q9H4I2 956 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 EHMT1Q9H9B1 1298 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 KCND2Q9NZV8 630 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 NAGPAQ9UK23 515 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 PIK3CDO00329 1044 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 FTCDO95954 541 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 NR3C1P04150 777 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 H2AFZP0C0S5 128 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 EEF2P13639 858 aaKnown RBP11.3□□□□□ -0.6
C11orf49-202ENST00000378615 PSMC2P35998 433 aaKnown RBP11.3□□□□□ -0.6
C11orf49-202ENST00000378615 STAT1P42224 750 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 JAM2P57087 298 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 EPHA7Q15375 998 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 PRR16Q569H4 304 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 APOBEC3HQ6NTF7 200 aaKnown RBP11.3□□□□□ -0.6
C11orf49-202ENST00000378615 TATDN1Q6P1N9 297 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 RUFY4Q6ZNE9 571 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 H2AFVQ71UI9 128 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 SLFN11Q7Z7L1 901 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 RASGEF1CQ8N431 466 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 TSEN2Q8NCE0 465 aaKnown RBP11.3□□□□□ -0.6
C11orf49-202ENST00000378615 C3orf20Q8ND61 904 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 BCAS4Q8TDM0 211 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 SCFD2Q8WU76 684 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 MS4A14Q96JA4 679 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 CCDC43Q96MW1 224 aaKnown RBP11.3□□□□□ -0.6
C11orf49-202ENST00000378615 TRERF1Q96PN7 1200 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 NAP1L3Q99457 506 aaPredicted RBP11.3□□□□□ -0.6
C11orf49-202ENST00000378615 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.3□□□□□ -0.6
C11orf49-202ENST00000378615 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 LCMT1Q9UIC8 334 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 GGA2Q9UJY4 613 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 NFU1Q9UMS0 254 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 NENFQ9UMX5 172 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 RABGAP1Q9Y3P9 1069 aa11.3□□□□□ -0.6
C11orf49-202ENST00000378615 COL2A1P02458 1487 aaPredicted RBP11.29□□□□□ -0.6
C11orf49-202ENST00000378615 POTEFA5A3E0 1075 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 KCNK3O14649 394 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 SPATA31C1P0DKV0 1188 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 NOP2P46087 812 aaKnown RBP11.29□□□□□ -0.6
C11orf49-202ENST00000378615 CRKP46108 304 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 CARSP49589 748 aaKnown RBP11.29□□□□□ -0.6
C11orf49-202ENST00000378615 BIRC3Q13489 604 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 MYBPC2Q14324 1141 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 DOK7Q18PE1 504 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 TTC31Q49AM3 519 aaPredicted RBP11.29□□□□□ -0.6
C11orf49-202ENST00000378615 SYDE2Q5VT97 1194 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 DPY19L2P1Q6NXN4 242 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 POTEGQ6S5H5 508 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 BTNL9Q6UXG8 535 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 ZNF571Q7Z3V5 609 aaPredicted RBP11.29□□□□□ -0.6
C11orf49-202ENST00000378615 SFR1Q86XK3 245 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 CERS5Q8N5B7 392 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 LRRC57Q8N9N7 239 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 CASKIN2Q8WXE0 1202 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 IFT81Q8WYA0 676 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 ATP6V1G3Q96LB4 118 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 REEP2Q9BRK0 252 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 PAGR1Q9BTK6 254 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 FGFBP2Q9BYJ0 223 aa11.29□□□□□ -0.6
C11orf49-202ENST00000378615 TTC7AQ9ULT0 858 aaPredicted RBP11.29□□□□□ -0.6
C11orf49-202ENST00000378615 SCN9AQ15858 1988 aa11.28□□□□□ -0.6
C11orf49-202ENST00000378615 NPHP3-ACAD11A0A0J9YXS1 232 aa11.28□□□□□ -0.6
C11orf49-202ENST00000378615 F8W031 263 aaPredicted RBP11.28□□□□□ -0.6
C11orf49-202ENST00000378615 ZNF76P36508 570 aa11.28□□□□□ -0.6
C11orf49-202ENST00000378615 ARID5AQ03989 594 aa11.28□□□□□ -0.6
C11orf49-202ENST00000378615 ICA1Q05084 483 aa11.28□□□□□ -0.6
C11orf49-202ENST00000378615 PABPC4Q13310 644 aaKnown RBP eCLIP11.28□□□□□ -0.6
C11orf49-202ENST00000378615 PPP2R5AQ15172 486 aa11.28□□□□□ -0.6
C11orf49-202ENST00000378615 TTMPQ5BVD1 217 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms