RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ZDHHC9Q9Y397 364 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 NFASCO94856 1347 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.54■□□□□ 0.08
PRPF18-202ENST00000378572 POTEB3A0JP26 581 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 FAM86C2PA6NEL3 165 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 hCG_1984214I3L0E3 225 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 ENPP3O14638 875 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 AP3B2Q13367 1082 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 PKP1Q13835 747 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 PLCB4Q15147 1175 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 PAN2Q504Q3 1202 aaKnown RBP15.54■□□□□ 0.08
PRPF18-202ENST00000378572 JAKMIP3Q5VZ66 844 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 FAM160B1Q5W0V3 765 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 POTEBQ6S5H4 581 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 ZNF713Q8N859 430 aaPredicted RBP15.54■□□□□ 0.08
PRPF18-202ENST00000378572 UIMC1Q96RL1 719 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 PCYT2Q99447 389 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 SLC26A6Q9BXS9 759 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 BARHL2Q9NY43 387 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 LRFN2Q9ULH4 789 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 MTMR6Q9Y217 621 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 HCN4Q9Y3Q4 1203 aa15.54■□□□□ 0.08
PRPF18-202ENST00000378572 AKAP17AQ02040 695 aaKnown RBP15.53■□□□□ 0.08
PRPF18-202ENST00000378572 ITGB3BPQ13352 177 aaPredicted RBP15.53■□□□□ 0.08
PRPF18-202ENST00000378572 CKAP2LQ8IYA6 745 aa15.53■□□□□ 0.08
PRPF18-202ENST00000378572 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.53■□□□□ 0.08
PRPF18-202ENST00000378572 FAM122AQ96E09 287 aa15.53■□□□□ 0.08
PRPF18-202ENST00000378572 AGO3Q9H9G7 860 aaKnown RBP15.53■□□□□ 0.08
PRPF18-202ENST00000378572 FAM50BQ9Y247 325 aa15.53■□□□□ 0.08
PRPF18-202ENST00000378572 DTNBO60941 627 aa15.52■□□□□ 0.08
PRPF18-202ENST00000378572 ZSCAN22P10073 491 aaPredicted RBP15.52■□□□□ 0.08
PRPF18-202ENST00000378572 BMPR1AP36894 532 aa15.52■□□□□ 0.08
PRPF18-202ENST00000378572 SREBF1P36956 1147 aa15.52■□□□□ 0.08
PRPF18-202ENST00000378572 PUS10Q3MIT2 529 aaKnown RBP15.52■□□□□ 0.08
PRPF18-202ENST00000378572 PLPPR4Q7Z2D5 763 aa15.52■□□□□ 0.08
PRPF18-202ENST00000378572 PLA2G4DQ86XP0 818 aa15.52■□□□□ 0.08
PRPF18-202ENST00000378572 GJD3Q8N144 294 aa15.52■□□□□ 0.08
PRPF18-202ENST00000378572 PABPC5Q96DU9 382 aaKnown RBP15.52■□□□□ 0.08
PRPF18-202ENST00000378572 FTHL17Q9BXU8 183 aa15.52■□□□□ 0.08
PRPF18-202ENST00000378572 PCDHA2Q9Y5H9 948 aa15.52■□□□□ 0.08
PRPF18-202ENST00000378572 GRM6O15303 877 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 RB1P06400 928 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 STAG3L1P0CL83 205 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 KRT76Q01546 638 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 NFX1Q12986 1120 aaKnown RBP15.51■□□□□ 0.07
PRPF18-202ENST00000378572 CLUL1Q15846 466 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 TMEM266Q2M3C6 531 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 CLEC17AQ6ZS10 378 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 TRMT1LQ7Z2T5 733 aaKnown RBP15.51■□□□□ 0.07
PRPF18-202ENST00000378572 FBXO18Q8NFZ0 1043 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 C8orf76Q96K31 380 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 LRFN3Q9BTN0 628 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 CELF4Q9BZC1 486 aaKnown RBP15.51■□□□□ 0.07
PRPF18-202ENST00000378572 LMAN2LQ9H0V9 348 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 IGFLR1Q9H665 355 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 PADI3Q9ULW8 664 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 H3BQV1 296 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 SCG2P13521 617 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 SPOUT1Q5T280 376 aaKnown RBP15.51■□□□□ 0.07
PRPF18-202ENST00000378572 MIS18BP1Q6P0N0 1132 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 PDXDC2PQ6P474 469 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 MTHFD1LQ6UB35 978 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 NPAS4Q8IUM7 802 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 TEX2Q8IWB9 1127 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 FAM178BQ8IXR5 827 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 FAM177A1Q8N128 213 aaPredicted RBP15.51■□□□□ 0.07
PRPF18-202ENST00000378572 CCDC12Q8WUD4 166 aaPredicted RBP15.51■□□□□ 0.07
PRPF18-202ENST00000378572 LINC01599Q8WXQ3 324 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 KHSRPQ92945 711 aaKnown RBP eCLIP15.51■□□□□ 0.075e-7■□□□□ 8.8
PRPF18-202ENST00000378572 PPP1R16BQ96T49 567 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 CD320Q9NPF0 282 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 ZNF302Q9NR11 478 aa15.51■□□□□ 0.07
PRPF18-202ENST00000378572 VPS37CA5D8V6 355 aaPredicted RBP15.5■□□□□ 0.07
PRPF18-202ENST00000378572 GRXCR2A6NFK2 248 aa15.5■□□□□ 0.07
PRPF18-202ENST00000378572 PPFIA3O75145 1194 aa15.5■□□□□ 0.07
PRPF18-202ENST00000378572 DGKIO75912 1065 aa15.5■□□□□ 0.07
PRPF18-202ENST00000378572 F13A1P00488 732 aa15.5■□□□□ 0.07
PRPF18-202ENST00000378572 SLC26A2P50443 739 aa15.5■□□□□ 0.07
PRPF18-202ENST00000378572 PKN1Q16512 942 aa15.5■□□□□ 0.07
PRPF18-202ENST00000378572 REXO1Q8N1G1 1221 aaKnown RBP15.5■□□□□ 0.07
PRPF18-202ENST00000378572 NEK9Q8TD19 979 aa15.5■□□□□ 0.07
PRPF18-202ENST00000378572 ZNF577Q9BSK1 485 aa15.5■□□□□ 0.07
PRPF18-202ENST00000378572 C6orf50Q9HD87 102 aa15.5■□□□□ 0.07
PRPF18-202ENST00000378572 ALG13Q9NP73 1137 aaKnown RBP15.5■□□□□ 0.07
PRPF18-202ENST00000378572 MRPL42Q9Y6G3 142 aaKnown RBP15.5■□□□□ 0.07
PRPF18-202ENST00000378572 IGSF9BQ9UPX0 1349 aa15.5■□□□□ 0.07
PRPF18-202ENST00000378572 SMIM35A0A1B0GVV1 85 aa15.49■□□□□ 0.07
PRPF18-202ENST00000378572 DENND3A2RUS2 1198 aa15.49■□□□□ 0.07
PRPF18-202ENST00000378572 C5orf67F2Z3F1 127 aa15.49■□□□□ 0.07
PRPF18-202ENST00000378572 MEIS1O00470 390 aa15.49■□□□□ 0.07
PRPF18-202ENST00000378572 HBP1O60381 514 aa15.49■□□□□ 0.07
PRPF18-202ENST00000378572 CCNE2O96020 404 aa15.49■□□□□ 0.07
PRPF18-202ENST00000378572 KLRC1P26715 233 aa15.49■□□□□ 0.07
PRPF18-202ENST00000378572 PFKFB3Q16875 520 aaPredicted RBP15.49■□□□□ 0.07
PRPF18-202ENST00000378572 CMTR2Q8IYT2 770 aaKnown RBP15.49■□□□□ 0.07
PRPF18-202ENST00000378572 ATP8B4Q8TF62 1192 aa15.49■□□□□ 0.07
PRPF18-202ENST00000378572 PPP2R3CQ969Q6 453 aa15.49■□□□□ 0.07
PRPF18-202ENST00000378572 RC3H2Q9HBD1 1191 aaKnown RBP15.49■□□□□ 0.07
PRPF18-202ENST00000378572 SAMM50Q9Y512 469 aa15.49■□□□□ 0.07
PRPF18-202ENST00000378572 ATP6V1DQ9Y5K8 247 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms