RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 CDK5RAP2Q96SN8 1893 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 MYH8P13535 1937 aa16.86■□□□□ 0.29
FXN-201ENST00000377270 E7EVH7 732 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 RNF225M0QZC1 329 aaPredicted RBP16.85■□□□□ 0.29
FXN-201ENST00000377270 LSM1O15116 133 aaKnown RBP16.85■□□□□ 0.29
FXN-201ENST00000377270 HSF2BPO75031 334 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 TRIM14Q14142 442 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 ZNF658Q5TYW1 1059 aaPredicted RBP16.85■□□□□ 0.29
FXN-201ENST00000377270 NANOGNBQ7Z5D8 188 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 ERICH1Q86X53 443 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 CLIP3Q96DZ5 547 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 C6orf50Q9HD87 102 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 RWDD2AQ9UIY3 292 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 DDX60LQ5H9U9 1706 aaKnown RBP16.85■□□□□ 0.29
FXN-201ENST00000377270 KLRG2A4D1S0 409 aaPredicted RBP16.85■□□□□ 0.29
FXN-201ENST00000377270 USP17L5A8MUK1 530 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 PDE2AO00408 941 aaPredicted RBP16.85■□□□□ 0.29
FXN-201ENST00000377270 EVI5O60447 810 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 PAK1Q13153 545 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 LETM2Q2VYF4 491 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 HVCN1Q96D96 273 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 PIGSQ96S52 555 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 IWS1Q96ST2 819 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 TMCO1Q9UM00 188 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 GDAQ9Y2T3 454 aa16.85■□□□□ 0.29
FXN-201ENST00000377270 HARSP12081 509 aaKnown RBP16.84■□□□□ 0.29
FXN-201ENST00000377270 HSPA1LP34931 641 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 C2orf54Q08AI8 447 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 TAF11Q15544 211 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 NAALADL2Q58DX5 795 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 ANKRD20A2Q5SQ80 823 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 SOGA3Q5TF21 947 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 ANKRD20A1Q5TYW2 823 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 ANKRD20A3Q5VUR7 823 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 TRIM68Q6AZZ1 485 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 KDM7AQ6ZMT4 941 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 MAEAQ7L5Y9 396 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 EHBP1Q8NDI1 1231 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 NELFBQ8WX92 580 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 SYT15Q9BQS2 421 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 PCDH18Q9HCL0 1135 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 N6AMT1Q9Y5N5 214 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 LAD1O00515 517 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 CCNT1O60563 726 aaKnown RBP16.84■□□□□ 0.29
FXN-201ENST00000377270 VIMP08670 466 aaKnown RBP16.84■□□□□ 0.29
FXN-201ENST00000377270 GNA11P29992 359 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 STIP1P31948 543 aaKnown RBP16.84■□□□□ 0.29
FXN-201ENST00000377270 KRT9P35527 623 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 CCT6AP40227 531 aaKnown RBP16.84■□□□□ 0.29
FXN-201ENST00000377270 CCDC122Q5T0U0 273 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 KCTD16Q68DU8 428 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 KRT25Q7Z3Z0 450 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 CHP1Q99653 195 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 PANK4Q9NVE7 773 aa16.84■□□□□ 0.29
FXN-201ENST00000377270 PRCPP42785 496 aa16.83■□□□□ 0.29
FXN-201ENST00000377270 EPHB4P54760 987 aa16.83■□□□□ 0.29
FXN-201ENST00000377270 NNTQ13423 1086 aa16.83■□□□□ 0.29
FXN-201ENST00000377270 NONOQ15233 471 aaKnown RBP eCLIP16.83■□□□□ 0.29
FXN-201ENST00000377270 RNF220Q5VTB9 566 aa16.83■□□□□ 0.29
FXN-201ENST00000377270 ANO7Q6IWH7 933 aa16.83■□□□□ 0.29
FXN-201ENST00000377270 MMGT1Q8N4V1 131 aa16.83■□□□□ 0.29
FXN-201ENST00000377270 NAF1Q96HR8 494 aaKnown RBP16.83■□□□□ 0.29
FXN-201ENST00000377270 HINFPQ9BQA5 517 aa16.83■□□□□ 0.29
FXN-201ENST00000377270 ZC3H12CQ9C0D7 883 aaKnown RBP16.83■□□□□ 0.29
FXN-201ENST00000377270 COA1Q9GZY4 146 aa16.83■□□□□ 0.29
FXN-201ENST00000377270 ATP6V0A2Q9Y487 856 aa16.83■□□□□ 0.29
FXN-201ENST00000377270 MYH1P12882 1939 aa16.83■□□□□ 0.29
FXN-201ENST00000377270 FRMPD2Q68DX3 1309 aaPredicted RBP16.83■□□□□ 0.28
FXN-201ENST00000377270 ZNF185O15231 689 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 TMCC1O94876 653 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 ZFXP17010 805 aaPredicted RBP16.83■□□□□ 0.28
FXN-201ENST00000377270 KRT31Q15323 416 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 EMBQ6PCB8 327 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 TMC4Q7Z404 712 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 TSEN2Q8NCE0 465 aaKnown RBP16.83■□□□□ 0.28
FXN-201ENST00000377270 KIFAP3Q92845 792 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 CENPOQ9BU64 300 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 CCSER1Q9C0I3 900 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 RABL2AQ9UBK7 228 aaPredicted RBP16.83■□□□□ 0.28
FXN-201ENST00000377270 NDUFB5O43674 189 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 SUPT3HO75486 399 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 SMARCA1P28370 1054 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 EIF6P56537 245 aaKnown RBP16.83■□□□□ 0.28
FXN-201ENST00000377270 FGD4Q96M96 766 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 MXD3Q9BW11 206 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 VPS16Q9H269 839 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 MTMR4Q9NYA4 1195 aa16.83■□□□□ 0.28
FXN-201ENST00000377270 HOXD11P31277 338 aaPredicted RBP16.82■□□□□ 0.28
FXN-201ENST00000377270 NOVP48745 357 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 MRPS35P82673 323 aaKnown RBP16.82■□□□□ 0.28
FXN-201ENST00000377270 APBA1Q02410 837 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 PLOD1Q02809 727 aaPredicted RBP16.82■□□□□ 0.28
FXN-201ENST00000377270 TXNRD1Q16881 649 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 DOK7Q18PE1 504 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 EMC10Q5UCC4 262 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 MAATS1Q7Z4T9 603 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 PROM2Q8N271 834 aa16.82■□□□□ 0.28
FXN-201ENST00000377270 UHMK1Q8TAS1 419 aaKnown RBP16.82■□□□□ 0.28
FXN-201ENST00000377270 NDST4Q9H3R1 872 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms