RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 C3orf20Q8ND61 904 aa12.52□□□□□ -0.41
TM9SF2-201ENST00000376387 TCP11Q8WWU5 503 aa12.52□□□□□ -0.41
TM9SF2-201ENST00000376387 CHMP6Q96FZ7 201 aa12.52□□□□□ -0.41
TM9SF2-201ENST00000376387 L3MBTL1Q9Y468 752 aa12.52□□□□□ -0.41
TM9SF2-201ENST00000376387 CCT8L1PA6NM43 557 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 E9PMD0 336 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 TMEM119Q4V9L6 283 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 FAM26FQ5R3K3 315 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 ZNF444Q8N0Y2 327 aaPredicted RBP12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 PROM2Q8N271 834 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 TLCD1Q96CP7 247 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 ZNF317Q96PQ6 595 aaPredicted RBP12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 ADAM7Q9H2U9 754 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 SLC24A3Q9HC58 644 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 BSDC1Q9NW68 430 aaPredicted RBP12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 FRMPD2Q68DX3 1309 aaPredicted RBP12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 DNAJC8O75937 253 aaPredicted RBP12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 EZRP15311 586 aaKnown RBP12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 RASA1P20936 1047 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 CDC25CP30307 473 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 IFI35P80217 286 aaPredicted RBP12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 IFFO1Q0D2I5 559 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 FAM133BQ5BKY9 247 aaKnown RBP12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 MSL1Q68DK7 614 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 ALKBH5Q6P6C2 394 aaKnown RBP12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 PEX26Q7Z412 305 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 TGFBRAP1Q8WUH2 860 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 SCFD1Q8WVM8 642 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 SELENOSQ9BQE4 189 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 TACO1Q9BSH4 297 aaKnown RBP12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 FAM129AQ9BZQ8 928 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 CCDC87Q9NVE4 849 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 STXBP5LQ9Y2K9 1186 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 PCDHA2Q9Y5H9 948 aa12.51□□□□□ -0.41
TM9SF2-201ENST00000376387 TLDC2A0PJX2 215 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 SMAPO00193 183 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 CES2O00748 559 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 GNA11P29992 359 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 CASP5P51878 434 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 PARP10Q53GL7 1025 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 KRT79Q5XKE5 535 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 MAPKAPK5Q8IW41 473 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 EIF1ADQ8N9N8 165 aaKnown RBP12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 ARPC5LQ9BPX5 153 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 AGAP1Q9UPQ3 857 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 NEBLO76041 1014 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 CLTAP09496 248 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 HIBADHP31937 336 aaKnown RBP12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 PSMD2Q13200 908 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 ADAM9Q13443 819 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 UBE2SQ16763 222 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 BICDL1Q6ZP65 573 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 TBC1D1Q86TI0 1168 aaPredicted RBP12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 DZIP1Q86YF9 867 aaKnown RBP12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 LRRC34Q8IZ02 419 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 GLG1Q92896 1179 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 SPZ1Q9BXG8 430 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 KCTD10Q9H3F6 313 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 ERVK-5Q9HDB9 667 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 USP17L5A8MUK1 530 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 FGGP02679 453 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 EPS15P42566 896 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 POU5F1Q01860 360 aaKnown RBP12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 DCAF12L1Q5VU92 463 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 DAAM2Q86T65 1068 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 MAGEC3Q8TD91 643 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 ATXN2LQ8WWM7 1075 aaKnown RBP12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 THOC1Q96FV9 657 aaKnown RBP12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 ZHX3Q9H4I2 956 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 BCAS3Q9H6U6 928 aa12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
TM9SF2-201ENST00000376387 MMEP08473 750 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 UCHL3P15374 230 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 ITPK1Q13572 414 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 MTMR3Q13615 1198 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 NAA25Q14CX7 972 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 TMEM266Q2M3C6 531 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 NT5DC3Q86UY8 548 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 PNMA8AQ86V59 439 aaPredicted RBP12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 CCDC197Q8NCU1 140 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 ELAC2Q9BQ52 826 aaKnown RBP12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 TXLNGYQ9BZA5 131 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 ATP6V0A4Q9HBG4 840 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 BTNL10A8MVZ5 291 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 PPP1R12AO14974 1030 aaPredicted RBP12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 TNNI2P48788 182 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 AADACL2Q6P093 401 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 RASGEF1CQ8N431 466 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 HAS1Q92839 578 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 RNF25Q96BH1 459 aaPredicted RBP12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 SPAG5Q96R06 1193 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 PRMT1Q99873 361 aaKnown RBP12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 ABCF3Q9NUQ8 709 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 BTG4Q9NY30 223 aa12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 SEC63Q9UGP8 760 aaKnown RBP12.49□□□□□ -0.41
TM9SF2-201ENST00000376387 HDAC9Q9UKV0 1011 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms